RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 GCNT2Q8N0V5 402 aa10.27□□□□□ -0.77
SMPD4-209ENST00000439886 TMEM37Q8WXS4 190 aa10.27□□□□□ -0.77
SMPD4-209ENST00000439886 RNF2Q99496 336 aa10.27□□□□□ -0.77
SMPD4-209ENST00000439886 CACNA1DQ01668 2161 aa10.27□□□□□ -0.77
SMPD4-209ENST00000439886 CCDC187A0A096LP49 1063 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 HPNP05981 417 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 SELEP16581 610 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 DTYMKP23919 212 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 ATP6V0CP27449 155 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 POLR2HP52434 150 aaKnown RBP10.26□□□□□ -0.77
SMPD4-209ENST00000439886 ADIRFQ15847 76 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 CMTM1Q8IZ96 169 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 C1orf87Q8N0U7 546 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 HOXB13Q92826 284 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-209ENST00000439886 LPAR2Q9HBW0 351 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 COPS7AQ9UBW8 275 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 ZNF705FA8MVS1 300 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-209ENST00000439886 SPRY1O43609 319 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-209ENST00000439886 ZNF705DP0CH99 300 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-209ENST00000439886 ZNF705BP0CI00 300 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-209ENST00000439886 SOX8P57073 446 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 HSF1Q00613 529 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 PCK2Q16822 640 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 ZNF784Q8NCA9 323 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-209ENST00000439886 OR14L1PQ8NHC6 308 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 MUCL1Q96DR8 90 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 GSX1Q9H4S2 264 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-209ENST00000439886 TUBA4BQ9H853 241 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 ANKUB1A6NFN9 424 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 C22orf46C9J442 243 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 HMGB3O15347 200 aaKnown RBP10.26□□□□□ -0.77
SMPD4-209ENST00000439886 GPR137BO60478 399 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 PTBP3O95758 552 aaKnown RBP10.26□□□□□ -0.77
SMPD4-209ENST00000439886 CST2P09228 141 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 SEC11BP0C7V7 166 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 IRF2P14316 349 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 KISS1Q15726 138 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 MPV17LQ2QL34 196 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 VAX1Q5SQQ9 334 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 FBXW9Q5XUX1 488 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 HIST3H2BBQ8N257 126 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 OR8B12Q8NGG6 310 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 FLVCR1-AS1Q8TAF5 88 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 ELSPBP1Q96BH3 223 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 TUBG2Q9NRH3 451 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 ARHGAP21Q5T5U3 1957 aa10.26□□□□□ -0.77
SMPD4-209ENST00000439886 BRWD1Q9NSI6 2320 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 A0A1W2PNR3 127 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 TMEM14DPA8MWL7 114 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 GGCTO75223 188 aaKnown RBP10.25□□□□□ -0.77
SMPD4-209ENST00000439886 TNFP01375 233 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 P2RY1P47900 373 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 ELOBQ15370 118 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 ATP6V1FQ16864 119 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 LGI3Q8N145 548 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 SLC35G3Q8N808 338 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 OR5C1Q8NGR4 320 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 ZNF160Q9HCG1 818 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 STRAPQ9Y3F4 350 aaKnown RBP10.25□□□□□ -0.77
SMPD4-209ENST00000439886 FAM157AC9JC47 383 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 FOXS1O43638 330 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 GAPDHP04406 335 aaKnown RBP10.25□□□□□ -0.77
SMPD4-209ENST00000439886 ZNF695Q8IW36 515 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 COMMD1Q8N668 190 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 OR13H1Q8NG92 308 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 OR5R1Q8NH85 324 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 PTX4Q96A99 478 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 ALKBH7Q9BT30 221 aaPredicted RBP10.25□□□□□ -0.77
SMPD4-209ENST00000439886 RPP25Q9BUL9 199 aaKnown RBP10.25□□□□□ -0.77
SMPD4-209ENST00000439886 PECRQ9BY49 303 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 SRPK3Q9UPE1 567 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 LAMP3Q9UQV4 416 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 HSPB6O14558 160 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 TNFSF14O43557 240 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 DFFBO76075 338 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 TM4SF4P48230 202 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 MTCP1P56278 107 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 FZD2Q14332 565 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 GAB4Q2WGN9 574 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 SLC22A25Q6T423 547 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 SLC16A14Q7RTX9 510 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 LFNGQ8NES3 379 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 BMFQ96LC9 184 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 KLRF1Q9NZS2 232 aa10.25□□□□□ -0.77
SMPD4-209ENST00000439886 CEBPZOSA8MTT3 80 aa10.24□□□□□ -0.77
SMPD4-209ENST00000439886 FTCDNL1E5RQL4 147 aa10.24□□□□□ -0.77
SMPD4-209ENST00000439886 MT-ATP6P00846 226 aa10.24□□□□□ -0.77
SMPD4-209ENST00000439886 PGA3P0DJD8 388 aa10.24□□□□□ -0.77
SMPD4-209ENST00000439886 FCARP24071 287 aa10.24□□□□□ -0.77
SMPD4-209ENST00000439886 DUSP1P28562 367 aa10.24□□□□□ -0.77
SMPD4-209ENST00000439886 APOBEC1P41238 236 aaKnown RBP10.24□□□□□ -0.77
SMPD4-209ENST00000439886 DAP3P51398 398 aaKnown RBP10.24□□□□□ -0.77
SMPD4-209ENST00000439886 ERVS71-1P61550 626 aa10.24□□□□□ -0.77
SMPD4-209ENST00000439886 RPS18P62269 152 aaKnown RBP10.24□□□□□ -0.77
SMPD4-209ENST00000439886 TESK1Q15569 626 aa10.24□□□□□ -0.77
SMPD4-209ENST00000439886 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.24□□□□□ -0.77
SMPD4-209ENST00000439886 TMEM176BQ3YBM2 270 aaPredicted RBP10.24□□□□□ -0.77
SMPD4-209ENST00000439886 WDR73Q6P4I2 378 aa10.24□□□□□ -0.77
SMPD4-209ENST00000439886 ZNF519Q8TB69 540 aa10.24□□□□□ -0.77
SMPD4-209ENST00000439886 SF3B5Q9BWJ5 86 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms