RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 IDNKQ5T6J7 187 aa11.54□□□□□ -0.56
TPM3-211ENST00000368531 Q6P435 159 aa11.54□□□□□ -0.56
TPM3-211ENST00000368531 Q8NFD4 153 aa11.54□□□□□ -0.56
TPM3-211ENST00000368531 FAM3DQ96BQ1 224 aa11.54□□□□□ -0.56
TPM3-211ENST00000368531 GSX1Q9H4S2 264 aaPredicted RBP11.54□□□□□ -0.56
TPM3-211ENST00000368531 ING3Q9NXR8 418 aa11.54□□□□□ -0.56
TPM3-211ENST00000368531 GHRLQ9UBU3 117 aa11.54□□□□□ -0.56
TPM3-211ENST00000368531 CREBBPQ92793 2442 aa11.54□□□□□ -0.56
TPM3-211ENST00000368531 CSMD1Q96PZ7 3565 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 TMEM82A0PJX8 343 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 CCDC160A6NGH7 325 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 AIPO00170 330 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 OR7C1O76099 320 aaPredicted RBP11.53□□□□□ -0.56
TPM3-211ENST00000368531 FOSL1P15407 271 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 NPY4RP50391 375 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 KRTAP1-1Q07627 177 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 UNC119Q13432 240 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 EDDM3AQ14507 147 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 ATAD3CQ5T2N8 411 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 SFXN4Q6P4A7 337 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 BRICD5Q6PL45 260 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 CLEC9AQ6UXN8 241 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 BTN2A1Q7KYR7 527 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 OR4S1Q8NGB4 309 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 OR51T1Q8NGJ9 327 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 KCNG3Q8TAE7 436 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 C1orf159Q96HA4 380 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 CST11Q9H112 138 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 PPA2Q9H2U2 334 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 LIN7BQ9HAP6 207 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 MMP26Q9NRE1 261 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 YAE1D1Q9NRH1 226 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 OR5V1Q9UGF6 321 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 MED13LQ71F56 2210 aa11.53□□□□□ -0.56
TPM3-211ENST00000368531 ABCA2Q9BZC7 2435 aa11.52□□□□□ -0.56
TPM3-211ENST00000368531 LOC105371242A0A075B767 164 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 TMEM272A0A1B0GTI8 110 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 TMEM14DPA8MWL7 114 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 C22orf46C9J442 243 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 K7N7A8 449 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 SLC33A1O00400 549 aaPredicted RBP11.52□□□□□ -0.57
TPM3-211ENST00000368531 PSPNO60542 156 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 NOL3O60936 208 aaKnown RBP11.52□□□□□ -0.57
TPM3-211ENST00000368531 ZNF737O75373 536 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 TK1P04183 234 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 SNRPBP14678 240 aaKnown RBP11.52□□□□□ -0.57
TPM3-211ENST00000368531 CPT2P23786 658 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 QRFPP83859 136 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 PLA2G7Q13093 441 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 IL13RA2Q14627 380 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 GRK1Q15835 563 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 PAN3Q58A45 887 aaKnown RBP11.52□□□□□ -0.57
TPM3-211ENST00000368531 C17orf107Q6ZR85 190 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 GLCCI1Q86VQ1 547 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 BPIFB2Q8N4F0 458 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 OR4M1Q8NGD0 313 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 NDNFQ8TB73 568 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 TMEM186Q96B77 213 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 MRPS24Q96EL2 167 aaKnown RBP11.52□□□□□ -0.57
TPM3-211ENST00000368531 SNX22Q96L94 193 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 TMEM59Q9BXS4 323 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 DCSTAMPQ9H295 470 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 HIF1ANQ9NWT6 349 aa11.52□□□□□ -0.57
TPM3-211ENST00000368531 MALRD1Q5VYJ5 2156 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 ITPR3Q14573 2671 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 TRAV20A0A0B4J274 112 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 MEX3AA1L020 520 aaKnown RBP11.51□□□□□ -0.57
TPM3-211ENST00000368531 A8MXK9 166 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 CD5LO43866 347 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 PAHP00439 452 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 IL1AP01583 271 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 RANBP1P43487 201 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 EDDM3BP56851 147 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 FAHD2BQ6P2I3 314 aaPredicted RBP11.51□□□□□ -0.57
TPM3-211ENST00000368531 GDPD3Q7L5L3 318 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 OR2W3Q7Z3T1 314 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 BIVMQ86UB2 503 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 TPRX1Q8N7U7 411 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 PPP1R35Q8TAP8 253 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 NEK7Q8TDX7 302 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 FAHD2AQ96GK7 314 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 Q96M66 194 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 NICN1Q9BSH3 213 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 SHARPINQ9H0F6 387 aa11.51□□□□□ -0.57
TPM3-211ENST00000368531 SEBOXQ9HB31 216 aaPredicted RBP11.51□□□□□ -0.57
TPM3-211ENST00000368531 TRAV24A0A0B4J272 114 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 A0A1W2PQ09 198 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 LMO1P25800 156 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 OR3A1P47881 315 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 EFNB2P52799 333 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 DVL1P1P54792 670 aaPredicted RBP11.5□□□□□ -0.57
TPM3-211ENST00000368531 TMBIM6P55061 237 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 RPS27AP62979 156 aaKnown RBP11.5□□□□□ -0.57
TPM3-211ENST00000368531 ATXN7L3Q14CW9 347 aaPredicted RBP11.5□□□□□ -0.57
TPM3-211ENST00000368531 SPCS2Q15005 226 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 MPV17LQ2QL34 196 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 NHLRC3Q5JS37 347 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 DCAF12L2Q5VW00 463 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 CD276Q5ZPR3 534 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 USP43Q70EL4 1123 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms