RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 FAM189A2Q15884 450 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 CHRFAM7AQ494W8 412 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 SPACA3Q8IXA5 215 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 SEMA6DQ8NFY4 1073 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 SECTM1Q8WVN6 248 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 SMIM3Q9BZL3 60 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 ZNF701Q9NV72 531 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-204ENST00000353317 C1orf123Q9NWV4 160 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 LUZP4Q9P127 313 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 MCTS1Q9ULC4 181 aaKnown RBP7.44□□□□□ -1.22
TRIM55-204ENST00000353317 MEMO1Q9Y316 297 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 SMG1Q96Q15 3661 aaKnown RBP7.44□□□□□ -1.22
TRIM55-204ENST00000353317 PRSS44E7EML9 344 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 NPIPA2E9PIF3 369 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 NPIPA3F8WFD2 350 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 JTBO76095 146 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 IGHV3-9P01782 118 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 IFNA4P05014 189 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 FOLR2P14207 255 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 HOXB1P14653 301 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-204ENST00000353317 FCGR2CP31995 323 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 THBS4P35443 961 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 FOXG1P55316 489 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-204ENST00000353317 ECH1Q13011 328 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 SURF2Q15527 256 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-204ENST00000353317 SWI5Q1ZZU3 235 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 NSUN5P2Q63ZY6 315 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 CLEC9AQ6UXN8 241 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 C6orf201Q7Z4U5 140 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 LYPD6BQ8NI32 183 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 TMEM54Q969K7 222 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 C14orf79Q96F83 325 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 ZNF2Q9BSG1 426 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-204ENST00000353317 HDHD3Q9BSH5 251 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-204ENST00000353317 EGLN1Q9GZT9 426 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 SMCO4Q9NRQ5 59 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 B4GALT7Q9UBV7 327 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 C14orf166Q9Y224 244 aaKnown RBP7.44□□□□□ -1.22
TRIM55-204ENST00000353317 AMDHD2Q9Y303 409 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 TIMM10BQ9Y5J6 103 aa7.44□□□□□ -1.22
TRIM55-204ENST00000353317 PCNX1Q96RV3 2341 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 CACNA1AO00555 2505 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 GJE1A6NN92 205 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 ZNF726A6NNF4 738 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 SERPINE3A8MV23 424 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 CYTIPO60759 359 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 PRF1P14222 555 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 ZNF44P15621 663 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 CPT2P23786 658 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 RBMXP38159 391 aaKnown RBP7.43□□□□□ -1.22
TRIM55-204ENST00000353317 ALDH3B1P43353 468 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 PPT1P50897 306 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 S100A12P80511 92 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 ERGIC1Q969X5 290 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 NABP1Q96AH0 204 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 WDYHV1Q96HA8 205 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 NAA11Q9BSU3 229 aaPredicted RBP7.43□□□□□ -1.22
TRIM55-204ENST00000353317 TUBD1Q9UJT1 453 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 MSRB2Q9Y3D2 182 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 TPRP12270 2363 aaKnown RBP7.43□□□□□ -1.22
TRIM55-204ENST00000353317 MSTNO14793 375 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 VAMP5O95183 116 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 IGLV3-1P01715 115 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 GAPDHP04406 335 aaKnown RBP7.43□□□□□ -1.22
TRIM55-204ENST00000353317 GLAP06280 429 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 FAHP16930 419 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 PAX6P26367 422 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 RAB5BP61020 215 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 GGNBP1Q5YKI7 109 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 SLC16A14Q7RTX9 510 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 TUSC5Q8IXB3 177 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 C15orf54Q8N8G6 183 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 TMEM178AQ8NBL3 297 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 HIST1H2BAQ96A08 127 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 MRPL24Q96A35 216 aaKnown RBP7.43□□□□□ -1.22
TRIM55-204ENST00000353317 PGAM5Q96HS1 289 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 LIME1Q9H400 295 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 GHRLQ9UBU3 117 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 STARD10Q9Y365 291 aa7.43□□□□□ -1.22
TRIM55-204ENST00000353317 LSM5Q9Y4Y9 91 aaKnown RBP7.43□□□□□ -1.22
TRIM55-204ENST00000353317 C5orf52A6NGY3 159 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 F5H5K5 113 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 FCGR2AP12318 317 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 CBR1P16152 277 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 GABRR1P24046 479 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 PTAFRP25105 342 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 GRB2P62993 217 aaKnown RBP7.42□□□□□ -1.22
TRIM55-204ENST00000353317 FAM3AP98173 230 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 KCNMB1Q16558 191 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 RSPO1Q2MKA7 263 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-204ENST00000353317 RBMS3Q6XE24 437 aaKnown RBP7.42□□□□□ -1.22
TRIM55-204ENST00000353317 SGPP2Q8IWX5 399 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 C20orf196Q8IYI0 205 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 RBMXL3Q8N7X1 1067 aaKnown RBP7.42□□□□□ -1.22
TRIM55-204ENST00000353317 UBAC2Q8NBM4 344 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 SNIP1Q8TAD8 396 aaKnown RBP7.42□□□□□ -1.22
TRIM55-204ENST00000353317 FGFBP3Q8TAT2 258 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 PIGTQ969N2 578 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 BSCL2Q96G97 398 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-204ENST00000353317 ALKBH3Q96Q83 286 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms