RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 MEF2CQ06413 473 aaPredicted RBP11.71□□□□□ -0.53
HMGN3-201ENST00000275036 CCDC58Q4VC31 144 aa11.71□□□□□ -0.53
HMGN3-201ENST00000275036 LDLRAD2Q5SZI1 272 aa11.71□□□□□ -0.53
HMGN3-201ENST00000275036 RPL22L1Q6P5R6 122 aaKnown RBP11.71□□□□□ -0.53
HMGN3-201ENST00000275036 GDPGP1Q6ZNW5 385 aa11.71□□□□□ -0.53
HMGN3-201ENST00000275036 LHFPL4Q7Z7J7 247 aa11.71□□□□□ -0.53
HMGN3-201ENST00000275036 SAXO1Q8IYX7 474 aa11.71□□□□□ -0.53
HMGN3-201ENST00000275036 DYNAPQ8N1N2 210 aa11.71□□□□□ -0.53
HMGN3-201ENST00000275036 ZSCAN4Q8NAM6 433 aaPredicted RBP11.71□□□□□ -0.53
HMGN3-201ENST00000275036 ZNF485Q8NCK3 441 aa11.71□□□□□ -0.53
HMGN3-201ENST00000275036 SETD9Q8NE22 299 aa11.71□□□□□ -0.53
HMGN3-201ENST00000275036 OR13C5Q8NGS8 318 aa11.71□□□□□ -0.53
HMGN3-201ENST00000275036 HAVCR2Q8TDQ0 301 aa11.71□□□□□ -0.53
HMGN3-201ENST00000275036 GGHQ92820 318 aa11.71□□□□□ -0.53
HMGN3-201ENST00000275036 NKX3-1Q99801 234 aaPredicted RBP11.71□□□□□ -0.53
HMGN3-201ENST00000275036 MEGF9Q9H1U4 602 aa11.71□□□□□ -0.53
HMGN3-201ENST00000275036 HEXA-AS1Q9H8Q6 139 aa11.71□□□□□ -0.53
HMGN3-201ENST00000275036 TAS2R4Q9NYW5 299 aa11.71□□□□□ -0.53
HMGN3-201ENST00000275036 A0A1B0GUS0 222 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 hCG_1809904A0A1W2PP81 198 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 A0A1W2PPE2 198 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 A0A1W2PR64 198 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 A0A1W2PRV1 198 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 ODF3BA8MYP8 253 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 OGG1O15527 345 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 KCNAB3O43448 404 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 RPSAP08865 295 aaKnown RBP11.7□□□□□ -0.54
HMGN3-201ENST00000275036 IGHV1-8P0DP01 117 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 CAPGP40121 348 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 DOC2BQ14184 412 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 Q6P435 159 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 TREML4Q6UXN2 200 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 TMPRSS11AQ6ZMR5 421 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 FBLIM1Q8WUP2 373 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 ORAI1Q96D31 301 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 TMEM80Q96HE8 168 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 ZNF714Q96N38 554 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 SSX3Q99909 188 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 NEK6Q9HC98 313 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 EXOSC4Q9NPD3 245 aaKnown RBP11.7□□□□□ -0.54
HMGN3-201ENST00000275036 BABAM2Q9NXR7 383 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 NKX1-2Q9UD57 310 aaPredicted RBP11.7□□□□□ -0.54
HMGN3-201ENST00000275036 EXOSC1Q9Y3B2 195 aaKnown RBP11.7□□□□□ -0.54
HMGN3-201ENST00000275036 RNF114Q9Y508 228 aa11.7□□□□□ -0.54
HMGN3-201ENST00000275036 hADV38S2A0JD32 116 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 IRGMA1A4Y4 181 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 BTBD17A6NE02 478 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 FAM90A8PA6NJQ4 464 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 GABRPO00591 440 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 SH2D1BO14796 132 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 MGST3O14880 152 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 XPNPEP2O43895 674 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 MMP23AO75900 390 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 CLPXO76031 633 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 RBP4P02753 201 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 TMEM225BP0DP42 221 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 MYL12AP19105 171 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 LMO1P25800 156 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 ST3GAL4Q11206 333 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 LY6EQ16553 131 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 ZFP41Q8N8Y5 198 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 OR5R1Q8NH85 324 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 PIFOQ8TCI5 191 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 GPR148Q8TDV2 347 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 TMEM106AQ96A25 262 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 SMIM19Q96E16 107 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 PPA2Q9H2U2 334 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 RHOFQ9HBH0 211 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 LINC00312Q9Y6C7 94 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 HSPE1-MOB4S4R3N1 261 aa11.69□□□□□ -0.54
HMGN3-201ENST00000275036 A0A0G2JK05 382 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 SLC33A1O00400 549 aaPredicted RBP11.68□□□□□ -0.54
HMGN3-201ENST00000275036 ARG1P05089 322 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 RAB3AP20336 220 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 ERP29P30040 261 aaKnown RBP11.68□□□□□ -0.54
HMGN3-201ENST00000275036 P2RX3P56373 397 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 RPS11P62280 158 aaKnown RBP eCLIP11.68□□□□□ -0.54
HMGN3-201ENST00000275036 SCN1BQ07699 218 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 LRRC75BQ2VPJ9 315 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 ZNF626Q68DY1 528 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 DMKNQ6E0U4 476 aaPredicted RBP11.68□□□□□ -0.54
HMGN3-201ENST00000275036 DHRS7BQ6IAN0 325 aaPredicted RBP11.68□□□□□ -0.54
HMGN3-201ENST00000275036 BRICD5Q6PL45 260 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 BAIAP2L2Q6UXY1 529 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 C8orf59Q8N0T1 100 aaPredicted RBP11.68□□□□□ -0.54
HMGN3-201ENST00000275036 OR11H6Q8NGC7 330 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 OR52N1Q8NH53 320 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 PPP1R35Q8TAP8 253 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 COQ2Q96H96 371 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 PGLYRP3Q96LB9 341 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 C16orf95Q9H693 158 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 GLS2Q9UI32 602 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 PSORS1C1Q9UIG5 152 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 ZNF281Q9Y2X9 895 aa11.68□□□□□ -0.54
HMGN3-201ENST00000275036 TRBV5-5A0A0J9YX44 114 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 TSPAN9O75954 239 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 ZNF44P15621 663 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 C21orf33P30042 268 aaPredicted RBP11.67□□□□□ -0.54
HMGN3-201ENST00000275036 TGFBR2P37173 567 aa11.67□□□□□ -0.54
HMGN3-201ENST00000275036 OR3A4PP47883 348 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms