RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Kcng3P59053 433 aa10.11□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Fgf11P70378 225 aa10.11□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Tmem211Q3UUA0 195 aa10.11□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Olfr988Q7TRA1 309 aa10.11□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Lrfn4Q80XU8 636 aa10.11□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Tsen54Q8C2A2 525 aa10.11□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Slc35e1Q8CD26 409 aa10.11□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Gpr37Q9QY42 600 aa10.11□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Arpc1bQ9WV32 372 aaKnown RBP10.11□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Best1O88870 551 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Ier3P46694 153 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 RelbQ04863 558 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Olfr1042Q7TR81 313 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Cpt1cQ8BGD5 798 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Actrt3Q8BXF8 369 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Abhd6Q8R2Y0 336 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Nudt16l1Q8VHN8 211 aaKnown RBP10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Olfr710Q9EP55 310 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Nek7Q9ES74 302 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Jag2Q9QYE5 1247 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Nlrc5C3VPR6 1915 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Rabl2E9Q9D5 223 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Olfr773F6VS78 311 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Gpr33O88416 339 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 StarP51557 284 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Lefty2P57785 368 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Gm2016Q3TQZ4 144 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Nkain2Q4PNJ2 208 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Rrnad1Q8BZG5 475 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Acaa1bQ8VCH0 424 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Olfr772Q8VGC5 311 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Zfp959Q91VM8 539 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Acaa1aQ921H8 424 aaKnown RBP10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Hint2Q9D0S9 163 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Acot12Q9DBK0 556 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Dnajc13D4AFX7 2248 aaKnown RBP10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 BC025446A0A087WQT1 134 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Vmn1r103K7N6X7 305 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Vmn1r151L7N288 305 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Cyp1a2P00186 513 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Ifna9P09235 190 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 P18524 117 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Dlx4P70436 240 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 B4galnt1Q09200 533 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Spatc1Q148B6 480 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Mpzl1Q3TEW6 270 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Zfp52Q8BJ45 724 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Elfn1Q8C8T7 828 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Tceal5Q8CCT4 200 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Vmn1r73Q8R293 303 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Vamp5Q9Z2P8 102 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Fam98cE9PYD1 344 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Gsc2P56916 198 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Il18P70380 192 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Hist1h2baP70696 127 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Crisp3Q03402 241 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Olfr328Q5NCD3 310 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Olfr1211Q7TR09 311 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Negr1Q80Z24 348 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 P2rx2Q8K3P1 485 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Olfr113Q8VEU4 312 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Olfr654Q8VF27 341 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Olfr1138Q8VFQ9 311 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Mrpl41Q9CQN7 135 aaKnown RBP10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Olfr1124A2AT86 318 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Gm498D3YYH9 372 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 FaimlJ3QPY3 178 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Tlx3O55144 291 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Il7rP16872 459 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Cnr1P47746 473 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Abcd3P55096 659 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Q3TTL0 348 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Pla2g7Q60963 440 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Mfsd8Q8BH31 519 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Lpar6Q8BMC0 344 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Coq3Q8BMS4 370 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Tmem239Q9DA47 151 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Lancl2Q9JJK2 450 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Pcdh15Q99PJ1 1943 aa10.1□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Gm45808A0A1B0GSH8 263 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Spink14B9EJP9 96 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Gm2663F6R7E8 247 aaKnown RBP10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 IfngP01580 155 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 GusbP12265 648 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Gcnt2P97402 401 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Rnf133Q14B02 382 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Cobll1Q3UMF0 1273 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Ewsr1Q61545 655 aaKnown RBP10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Gm9999Q8C5Y2 53 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Defb36Q8K3U4 67 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Mrgpra8Q91ZC4 305 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Nmnat3Q99JR6 245 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Ms4a8Q99N10 290 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 1810009J06RikQ9CPN7 247 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 RTRAFQ9CQE8 244 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Ndufa9Q9DC69 377 aaKnown RBP10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Nkx2-4Q9EQM3 354 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Col9a3A2ACT7 680 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Olfr914E9PW59 316 aa10.09□□□□□ -0.79
Topbp1-201ENSMUST00000035164 Csf3P09920 208 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms