RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 OR4D6Q8NGJ1 314 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 OR6M1Q8NGM8 313 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 MDFIQ99750 246 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 SSBP3Q9BWW4 388 aaPredicted RBP12.25□□□□□ -0.45
PNKP-221ENST00000627317 LPAR2Q9HBW0 351 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 PCDHB16Q9NRJ7 776 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 IL36GQ9NZH8 169 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 IL36RNQ9UBH0 155 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 CTSZQ9UBR2 303 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 LPAR3Q9UBY5 353 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 CLN8Q9UBY8 286 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 GLS2Q9UI32 602 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 KCNS2Q9ULS6 477 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 B4DSR2 109 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 FAM157AC9JC47 383 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 ZNF780AO75290 641 aaPredicted RBP12.24□□□□□ -0.45
PNKP-221ENST00000627317 FOXH1O75593 365 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 TGFAP01135 160 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 TFF1P04155 84 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 TFAP2AP05549 437 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 RAB3BP20337 219 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 SERPINA2P20848 420 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 PRDX2P32119 198 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 ALDH3B2P48448 385 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 CEBPDP49716 269 aaPredicted RBP12.24□□□□□ -0.45
PNKP-221ENST00000627317 CAPZA1P52907 286 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 FGF12P61328 243 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 SEC61A1P61619 476 aaKnown RBP12.24□□□□□ -0.45
PNKP-221ENST00000627317 IKZF1Q13422 519 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 GPR176Q14439 515 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 RAB11BQ15907 218 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 SPIN3Q5JUX0 258 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 C1orf100Q5SVJ3 147 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 ATPAF1Q5TC12 328 aaPredicted RBP12.24□□□□□ -0.45
PNKP-221ENST00000627317 ASCL4Q6XD76 172 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 GDPGP1Q6ZNW5 385 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 ZNF788Q6ZQV5 615 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 LYPD6Q86Y78 171 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 TBC1D15Q8TC07 691 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 MED30Q96HR3 178 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 GAFA1Q96PS6 74 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 CENPOQ9BU64 300 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 FUNDC2Q9BWH2 189 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 KAAG1Q9UBP8 84 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 ZNF222Q9UK12 451 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 V9GY05 133 aa12.24□□□□□ -0.45
PNKP-221ENST00000627317 A0A1B0GW55 424 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 SHISA3A0PJX4 238 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 SLC17A2O00624 439 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 TNFRSF13BO14836 293 aaPredicted RBP12.23□□□□□ -0.45
PNKP-221ENST00000627317 SIGLEC5O15389 551 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 PHF1O43189 567 aaPredicted RBP12.23□□□□□ -0.45
PNKP-221ENST00000627317 NDUFB3O43676 98 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 HAND1O96004 215 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 MSMBP08118 114 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 UBBP0CG47 229 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 DUX4L2P0CJ85 424 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 DUX4L3P0CJ86 424 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 DUX4L4P0CJ87 422 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 DUX4L5P0CJ88 424 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 DUX4L6P0CJ89 424 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 DUX4L7P0CJ90 424 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 SELLP14151 372 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 HTR2CP28335 458 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 DUSP1P28562 367 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 RANBP1P43487 201 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 NPY4RP50391 375 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 DVL1P1P54792 670 aaPredicted RBP12.23□□□□□ -0.45
PNKP-221ENST00000627317 OR10A3P58181 314 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 LCN2P80188 198 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 DGUOKQ16854 277 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 LRRC10Q5BKY1 277 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 WDR25Q64LD2 544 aaPredicted RBP12.23□□□□□ -0.45
PNKP-221ENST00000627317 ELP2Q6IA86 826 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 DUX4L9Q6RFH8 374 aaPredicted RBP12.23□□□□□ -0.45
PNKP-221ENST00000627317 ASCC1Q8N9N2 400 aaKnown RBP12.23□□□□□ -0.45
PNKP-221ENST00000627317 TMEM185AQ8NFB2 350 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 ST8SIA4Q92187 359 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 SDSLQ96GA7 329 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 GFI1Q99684 422 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 GHRLQ9UBU3 117 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 DUX4Q9UBX2 424 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 OR5V1Q9UGF6 321 aa12.23□□□□□ -0.45
PNKP-221ENST00000627317 SMIM30A4D0T7 59 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 A8MXK9 166 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 DVL1O14640 695 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 SH2D1BO14796 132 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 SLC22A1O15245 554 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 CRTAPO75718 401 aaPredicted RBP12.22□□□□□ -0.45
PNKP-221ENST00000627317 GTF2F2P13984 249 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 AMY2BP19961 511 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 SDC2P34741 201 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 RPL5P46777 297 aaKnown RBP12.22□□□□□ -0.45
PNKP-221ENST00000627317 LSM3P62310 102 aaKnown RBP12.22□□□□□ -0.45
PNKP-221ENST00000627317 ZNF146Q15072 292 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 P2RY14Q15391 338 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 CR1LQ2VPA4 569 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 IL17RELQ6ZVW7 336 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 GLCCI1Q86VQ1 547 aa12.22□□□□□ -0.45
PNKP-221ENST00000627317 TPRA1Q86W33 373 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms