RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 FAM172BPA6NC97 362 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 MGST3O14880 152 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 CYB5AP00167 134 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 ECI1P42126 302 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 MAGEA2P43356 314 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 APOFQ13790 326 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 RBM39Q14498 530 aaKnown RBP13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 SPATS1Q496A3 300 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 FAM98BQ52LJ0 330 aaKnown RBP13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 C9orf66Q5T8R8 295 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 PRAMEF5Q5TYX0 476 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 C16orf89Q6UX73 402 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 ZNF695Q8IW36 515 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 Q8IYB0 196 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 COMMD1Q8N668 190 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 GIPC3Q8TF64 312 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 PRR25Q96S07 402 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 FEVQ99581 238 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 CCDC134Q9H6E4 229 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 MAGIXQ9H6Y5 334 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 ZNF556Q9HAH1 456 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 V9GYS6 101 aa13.76□□□□□ -0.21
CHMP4A-211ENST00000609024 SERPINA3P01011 423 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 TTRP02766 147 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 AMY1AP04745 511 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 AMY2AP04746 511 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 CDK2P24941 298 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 MNAT1P51948 309 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 ROM1Q03395 351 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 MFGE8Q08431 387 aaPredicted RBP13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 HES1Q14469 280 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 CASC10Q5T4H9 136 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 TPTE2P1Q5T6R2 138 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 FOXRED2Q8IWF2 684 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 OR5M8Q8NGP6 311 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 P2RX4Q99571 388 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 CADM1Q9BY67 442 aaKnown RBP13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 MYLK2Q9H1R3 596 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 MTCH1Q9NZJ7 389 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 LSM4Q9Y4Z0 139 aaKnown RBP13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 DSCAML1Q8TD84 2053 aa13.75□□□□□ -0.21
CHMP4A-211ENST00000609024 DHRS7CA6NNS2 312 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 CCL24O00175 119 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 GATBO75879 557 aaKnown RBP13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 MMP23AO75900 390 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 IGHA1P01876 353 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 FUT6P51993 359 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 P2RX3P56373 397 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 GK3PQ14409 553 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 SLC25A26Q70HW3 274 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 BBS1Q8NFJ9 593 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 OR52N4Q8NGI2 321 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 OR4D6Q8NGJ1 314 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 OR14K1Q8NGZ2 314 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 BORCS8Q96FH0 119 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 DUX3Q96PT4 197 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 ADI1Q9BV57 179 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 PCDHB16Q9NRJ7 776 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 ACTR3BQ9P1U1 418 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 OR52A1Q9UKL2 312 aa13.74□□□□□ -0.21
CHMP4A-211ENST00000609024 OOSP1A8MZH6 123 aa13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 F8VVB4 439 aa13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 F8VWA3 439 aa13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 BUB1B-PAK6H3BSN5 160 aa13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 GNGT2O14610 69 aa13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 ERP29P30040 261 aaKnown RBP13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 LUMP51884 338 aaPredicted RBP13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 SNU13P55769 128 aaKnown RBP13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 NKAPLQ5M9Q1 402 aa13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 HEPN1Q6WQI6 88 aa13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 C18orf65Q6ZTR6 163 aa13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 ELMOD2Q8IZ81 293 aa13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 DEFB107AQ8IZN7 70 aa13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 RPEQ96AT9 228 aa13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 NOL4LQ96MY1 436 aaPredicted RBP13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 ELAC2Q9BQ52 826 aaKnown RBP13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 HHLA2Q9UM44 414 aa13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 SNX5Q9Y5X3 404 aa13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 R4GMQ9 66 aa13.73□□□□□ -0.21
CHMP4A-211ENST00000609024 LY86O95711 162 aa13.72□□□□□ -0.21
CHMP4A-211ENST00000609024 LYL1P12980 280 aa13.72□□□□□ -0.21
CHMP4A-211ENST00000609024 ATP6V1B2P21281 511 aa13.72□□□□□ -0.21
CHMP4A-211ENST00000609024 DUSP1P28562 367 aa13.72□□□□□ -0.21
CHMP4A-211ENST00000609024 HLA-DRB5Q30154 266 aa13.72□□□□□ -0.21
CHMP4A-211ENST00000609024 ZNF322Q6U7Q0 402 aaPredicted RBP13.72□□□□□ -0.21
CHMP4A-211ENST00000609024 SLC35E3Q7Z769 313 aa13.72□□□□□ -0.21
CHMP4A-211ENST00000609024 FAM58AQ8N1B3 248 aa13.72□□□□□ -0.21
CHMP4A-211ENST00000609024 OR8U1Q8NH10 309 aa13.72□□□□□ -0.21
CHMP4A-211ENST00000609024 TOMM40LQ969M1 308 aa13.72□□□□□ -0.21
CHMP4A-211ENST00000609024 HRASLS5Q96KN8 279 aa13.72□□□□□ -0.21
CHMP4A-211ENST00000609024 CNN2Q99439 309 aaKnown RBP13.72□□□□□ -0.21
CHMP4A-211ENST00000609024 TAS2R3Q9NYW6 316 aa13.72□□□□□ -0.21
CHMP4A-211ENST00000609024 AMMECR1Q9Y4X0 333 aaPredicted RBP13.72□□□□□ -0.21
CHMP4A-211ENST00000609024 SEC14L6B5MCN3 397 aa13.71□□□□□ -0.21
CHMP4A-211ENST00000609024 SIRPB1O00241 398 aa13.71□□□□□ -0.21
CHMP4A-211ENST00000609024 SH2D1BO14796 132 aa13.71□□□□□ -0.21
CHMP4A-211ENST00000609024 PSPNO60542 156 aa13.71□□□□□ -0.21
CHMP4A-211ENST00000609024 SASH3O75995 380 aa13.71□□□□□ -0.21
CHMP4A-211ENST00000609024 CST1P01037 141 aa13.71□□□□□ -0.21
CHMP4A-211ENST00000609024 IGLV1-47P01700 117 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms