RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 KCTD7Q96MP8 289 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 SMR3AQ99954 134 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 SEBOXQ9HB31 216 aaPredicted RBP11.95□□□□□ -0.5
VRK3-213ENST00000597215 IL36RNQ9UBH0 155 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 GHRLQ9UBU3 117 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 OR5V1Q9UGF6 321 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 AK6Q9Y3D8 172 aaKnown RBP11.95□□□□□ -0.5
VRK3-213ENST00000597215 CSPG4Q6UVK1 2322 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 TRAV20A0A0B4J274 112 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 A0A1B0GW55 424 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 KIAA1324LA8MWY0 1029 aaPredicted RBP11.94□□□□□ -0.5
VRK3-213ENST00000597215 SLC17A2O00624 439 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 AIREO43918 545 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 LY6G6DO95868 133 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 HAND1O96004 215 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 TGFAP01135 160 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 CHRM2P08172 466 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 UBBP0CG47 229 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 DUX4L2P0CJ85 424 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 DUX4L3P0CJ86 424 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 DUX4L4P0CJ87 422 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 DUX4L5P0CJ88 424 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 DUX4L6P0CJ89 424 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 DUX4L7P0CJ90 424 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 RAB3BP20337 219 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 SERPINA2P20848 420 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 RANBP1P43487 201 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 ALDH3B2P48448 385 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 CEBPDP49716 269 aaPredicted RBP11.94□□□□□ -0.5
VRK3-213ENST00000597215 DVL1P1P54792 670 aaPredicted RBP11.94□□□□□ -0.5
VRK3-213ENST00000597215 SNU13P55769 128 aaKnown RBP11.94□□□□□ -0.5
VRK3-213ENST00000597215 DGUOKQ16854 277 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 SLC22A6Q4U2R8 563 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 DUX4L9Q6RFH8 374 aaPredicted RBP11.94□□□□□ -0.5
VRK3-213ENST00000597215 OSR2Q8N2R0 312 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 Q8NFD4 153 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 OR6M1Q8NGM8 313 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 ST8SIA4Q92187 359 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 TMEM186Q96B77 213 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 GFI1Q99684 422 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 PLGRKTQ9HBL7 147 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 DUX4Q9UBX2 424 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 POLR3KQ9Y2Y1 108 aaPredicted RBP11.94□□□□□ -0.5
VRK3-213ENST00000597215 V9GY05 133 aa11.94□□□□□ -0.5
VRK3-213ENST00000597215 SHISA3A0PJX4 238 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 SH2D1BO14796 132 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 SLC22A1O15245 554 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 GPR37O15354 613 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 TFAP2AP05549 437 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 GTF2F2P13984 249 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 SELLP14151 372 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 ZFP36P26651 326 aaKnown RBP11.93□□□□□ -0.5
VRK3-213ENST00000597215 HTR2CP28335 458 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 CAPZA1P52907 286 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 CAV3P56539 151 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 COL10A1Q03692 680 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 IL13RA2Q14627 380 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 C11orf91Q3C1V1 193 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 CD276Q5ZPR3 534 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 TPRA1Q86W33 373 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 ZNRF1Q8ND25 227 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 TMEM185AQ8NFB2 350 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 OR51T1Q8NGJ9 327 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 CENPOQ9BU64 300 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 FUNDC2Q9BWH2 189 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 SLC25A10Q9UBX3 287 aaPredicted RBP11.93□□□□□ -0.5
VRK3-213ENST00000597215 SCOCQ9UIL1 159 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 METRNQ9UJH8 293 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 KCNS2Q9ULS6 477 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 MAB21L2Q9Y586 359 aa11.93□□□□□ -0.5
VRK3-213ENST00000597215 LOC105371242A0A075B767 164 aa11.92□□□□□ -0.5
VRK3-213ENST00000597215 PPIAL4CA0A0B4J2A2 164 aa11.92□□□□□ -0.5
VRK3-213ENST00000597215 ECDO95905 644 aaPredicted RBP11.92□□□□□ -0.5
VRK3-213ENST00000597215 DUSP1P28562 367 aa11.92□□□□□ -0.5
VRK3-213ENST00000597215 RBM11P57052 281 aaKnown RBP11.92□□□□□ -0.5
VRK3-213ENST00000597215 RAB11BQ15907 218 aa11.92□□□□□ -0.5
VRK3-213ENST00000597215 PIGYQ3MUY2 71 aa11.92□□□□□ -0.5
VRK3-213ENST00000597215 NHLRC3Q5JS37 347 aa11.92□□□□□ -0.5
VRK3-213ENST00000597215 GPR141Q7Z602 305 aa11.92□□□□□ -0.5
VRK3-213ENST00000597215 ASCC1Q8N9N2 400 aaKnown RBP11.92□□□□□ -0.5
VRK3-213ENST00000597215 MRPS24Q96EL2 167 aaKnown RBP11.92□□□□□ -0.5
VRK3-213ENST00000597215 C1orf147Q96MC9 270 aaPredicted RBP11.92□□□□□ -0.5
VRK3-213ENST00000597215 FAM234AQ9H0X4 552 aa11.92□□□□□ -0.5
VRK3-213ENST00000597215 CST11Q9H112 138 aa11.92□□□□□ -0.5
VRK3-213ENST00000597215 GSX1Q9H4S2 264 aaPredicted RBP11.92□□□□□ -0.5
VRK3-213ENST00000597215 HIF1ANQ9NWT6 349 aa11.92□□□□□ -0.5
VRK3-213ENST00000597215 ARHGAP32A7KAX9 2087 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 TLN2Q9Y4G6 2542 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 A0A1W2PP11 408 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 FCN3O75636 299 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 CRTAPO75718 401 aaPredicted RBP11.91□□□□□ -0.5
VRK3-213ENST00000597215 BPNT1O95861 308 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 OR2H2O95918 312 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 TK1P04183 234 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 ZNF44P15621 663 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 NDUFB7P17568 137 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 GATA3P23771 443 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 SDC2P34741 201 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 OR10A3P58181 314 aa11.91□□□□□ -0.5
VRK3-213ENST00000597215 DCAF12L2Q5VW00 463 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms