RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 RNF212BA8MTL3 300 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 SIRPB1O00241 398 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 GABRPO00591 440 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 ALX3O95076 343 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 HTR3BO95264 441 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 HAND1O96004 215 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 CD1AP06126 327 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 SFTPBP07988 381 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 CHRM2P08172 466 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 EPHA1P21709 976 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 GABRR1P24046 479 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 ZNF93P35789 620 aaPredicted RBP9.16□□□□□ -0.94
LIG1-211ENST00000596457 OR3A4PP47883 348 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 ZP1P60852 638 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 RSU1Q15404 277 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 ACSM3Q53FZ2 586 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 CRIP3Q6Q6R5 217 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 CEACAM19Q7Z692 300 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 PDZD9Q8IXQ8 264 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 SDSLQ96GA7 329 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 DERL3Q96Q80 235 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 DCTN5Q9BTE1 182 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 TMEM138Q9NPI0 162 aa9.16□□□□□ -0.94
LIG1-211ENST00000596457 TRBV5-7A0A0A0MS05 114 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 TRAV40A0A0B4J280 105 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 MEX3AA1L020 520 aaKnown RBP9.15□□□□□ -0.94
LIG1-211ENST00000596457 MAGEA13PA6NCF6 341 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 SH2D1BO14796 132 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 GPR37O15354 613 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 KDM4BO94953 1096 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 CDRT1O95170 752 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 TK1P04183 234 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 ALDOBP05062 364 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 LIPFP07098 398 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 IGHV4-38-2P0DP08 117 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 IGFBP3P17936 291 aaPredicted RBP9.15□□□□□ -0.94
LIG1-211ENST00000596457 MAPK3P27361 379 aaPredicted RBP9.15□□□□□ -0.94
LIG1-211ENST00000596457 CAV3P56539 151 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 EDDM3BP56851 147 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 GABARAPL2P60520 117 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 RPS25P62851 125 aaKnown RBP9.15□□□□□ -0.94
LIG1-211ENST00000596457 PRB3Q04118 309 aaPredicted RBP9.15□□□□□ -0.94
LIG1-211ENST00000596457 EDDM3AQ14507 147 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 KLF17Q5JT82 389 aaPredicted RBP9.15□□□□□ -0.94
LIG1-211ENST00000596457 FAM27D1Q5T7N8 215 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 ZNF529Q6P280 563 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 SAXO1Q8IYX7 474 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 BPIFB2Q8N4F0 458 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 JAGN1Q8N5M9 183 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 MS4A15Q8N5U1 240 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 LHX4Q969G2 390 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 DACT3Q96B18 629 aaPredicted RBP9.15□□□□□ -0.94
LIG1-211ENST00000596457 WDFY2Q96P53 400 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 MGLLQ99685 303 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 MS4A7Q9GZW8 240 aaPredicted RBP9.15□□□□□ -0.94
LIG1-211ENST00000596457 CHST6Q9GZX3 395 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 METTL9Q9H1A3 318 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 TCF7L1Q9HCS4 588 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 HMG20AQ9NP66 347 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 EXOSC4Q9NPD3 245 aaKnown RBP9.15□□□□□ -0.94
LIG1-211ENST00000596457 ING3Q9NXR8 418 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 NUP50Q9UKX7 468 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 FOXJ3Q9UPW0 622 aa9.15□□□□□ -0.94
LIG1-211ENST00000596457 A0A1W2PRD5 423 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 A0A1W2PRF3 423 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 A0A1W2PRM7 423 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 PIN1P1O15428 100 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 CSTBP04080 98 aaKnown RBP9.14□□□□□ -0.95
LIG1-211ENST00000596457 ZNF44P15621 663 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 SERPINA2P20848 420 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 FPR2P25090 351 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 PTGFRP43088 359 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 DLX1P56177 255 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 EMX1Q04741 257 aaPredicted RBP9.14□□□□□ -0.95
LIG1-211ENST00000596457 MLLT11Q13015 90 aaPredicted RBP9.14□□□□□ -0.95
LIG1-211ENST00000596457 SCGB2A2Q13296 93 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 UNQ9370/PRO34162Q6UXP9 181 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 BRD3OSQ6XYD6 125 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 GDPD3Q7L5L3 318 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 ZNF367Q7RTV3 350 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 VMO1Q7Z5L0 202 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 CMTM4Q8IZR5 234 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 BCL6BQ8N143 479 aaPredicted RBP9.14□□□□□ -0.95
LIG1-211ENST00000596457 SVOPQ8N4V2 548 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 ZSCAN4Q8NAM6 433 aaPredicted RBP9.14□□□□□ -0.95
LIG1-211ENST00000596457 LY6G5BQ8NDX9 201 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 MUL1Q969V5 352 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 SNX22Q96L94 193 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 SLC6A7Q99884 636 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 YTHDF1Q9BYJ9 559 aaKnown RBP9.14□□□□□ -0.95
LIG1-211ENST00000596457 ISYNA1Q9NPH2 558 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 ACOT13Q9NPJ3 140 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 SIRT7Q9NRC8 400 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 C19orf12Q9NSK7 152 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 ZNF69Q9UC07 566 aa9.14□□□□□ -0.95
LIG1-211ENST00000596457 SOX21Q9Y651 276 aaPredicted RBP9.14□□□□□ -0.95
LIG1-211ENST00000596457 ANK3Q12955 4377 aaKnown RBP9.13□□□□□ -0.95
LIG1-211ENST00000596457 TMEM82A0PJX8 343 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 K7N7A8 449 aa9.13□□□□□ -0.95
LIG1-211ENST00000596457 DEGS1O15121 323 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms