RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 MYL12AP19105 171 aa16.7■□□□□ 0.26
SS18-224ENST00000584083 IER3P46695 156 aa16.7■□□□□ 0.26
SS18-224ENST00000584083 EDDM3BP56851 147 aa16.7■□□□□ 0.26
SS18-224ENST00000584083 ACSM1Q08AH1 577 aa16.7■□□□□ 0.26
SS18-224ENST00000584083 IL18R1Q13478 541 aa16.7■□□□□ 0.26
SS18-224ENST00000584083 OR5D18Q8NGL1 313 aa16.7■□□□□ 0.26
SS18-224ENST00000584083 GLS2Q9UI32 602 aa16.7■□□□□ 0.26
SS18-224ENST00000584083 GABRR1P24046 479 aa16.69■□□□□ 0.26
SS18-224ENST00000584083 EDDM3AQ14507 147 aa16.69■□□□□ 0.26
SS18-224ENST00000584083 ZNF273Q14593 569 aa16.69■□□□□ 0.26
SS18-224ENST00000584083 OR2G6Q5TZ20 316 aa16.69■□□□□ 0.26
SS18-224ENST00000584083 RPL22L1Q6P5R6 122 aaKnown RBP16.69■□□□□ 0.26
SS18-224ENST00000584083 OR8H2Q8N162 312 aa16.69■□□□□ 0.26
SS18-224ENST00000584083 PARP16Q8N5Y8 322 aa16.69■□□□□ 0.26
SS18-224ENST00000584083 SNX22Q96L94 193 aa16.69■□□□□ 0.26
SS18-224ENST00000584083 ZNF747Q9BV97 191 aa16.69■□□□□ 0.26
SS18-224ENST00000584083 HEXA-AS1Q9H8Q6 139 aa16.69■□□□□ 0.26
SS18-224ENST00000584083 CHCHD3Q9NX63 227 aaKnown RBP16.69■□□□□ 0.26
SS18-224ENST00000584083 DIMT1Q9UNQ2 313 aaKnown RBP16.69■□□□□ 0.26
SS18-224ENST00000584083 EXOSC1Q9Y3B2 195 aaKnown RBP16.69■□□□□ 0.26
SS18-224ENST00000584083 TMEM82A0PJX8 343 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 MEX3AA1L020 520 aaKnown RBP16.68■□□□□ 0.26
SS18-224ENST00000584083 BTBD17A6NE02 478 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 SULT1B1O43704 296 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 TMEM225BP0DP42 221 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 MDKP21741 143 aaPredicted RBP16.68■□□□□ 0.26
SS18-224ENST00000584083 CAPGP40121 348 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 SOX2P48431 317 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 MED21Q13503 144 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 CCDC58Q4VC31 144 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 OGFRL1Q5TC84 451 aaPredicted RBP16.68■□□□□ 0.26
SS18-224ENST00000584083 HCP5Q6MZN7 132 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 RNF144BQ7Z419 303 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 ZSCAN4Q8NAM6 433 aaPredicted RBP16.68■□□□□ 0.26
SS18-224ENST00000584083 DYRK2Q92630 601 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 TMEM80Q96HE8 168 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 CHST6Q9GZX3 395 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 SEBOXQ9HB31 216 aaPredicted RBP16.68■□□□□ 0.26
SS18-224ENST00000584083 HMG20AQ9NP66 347 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 ZNRD1Q9P1U0 126 aa16.68■□□□□ 0.26
SS18-224ENST00000584083 IGKV1-12A0A0C4DH73 117 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 POM121CA8CG34 1229 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 CASQ2O14958 399 aaPredicted RBP16.67■□□□□ 0.26
SS18-224ENST00000584083 GPR137BO60478 399 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 IGKV1D-12P01611 117 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 COX7A1P24310 79 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 RAG2P55895 527 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 ERVFRD-1P60508 538 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 ZNF146Q15072 292 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 GRK1Q15835 563 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 MIDNQ504T8 468 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 SPIN3Q5JUX0 258 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 XAF1Q6GPH4 301 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 C8orf59Q8N0T1 100 aaPredicted RBP16.67■□□□□ 0.26
SS18-224ENST00000584083 C11orf42Q8N5U0 333 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 OR4F5Q8NH21 305 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 GPR148Q8TDV2 347 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 VCXQ9H320 206 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 BABAM2Q9NXR7 383 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 C1RLQ9NZP8 487 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 CLEC2DQ9UHP7 191 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 GSTK1Q9Y2Q3 226 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 PCDHGB5Q9Y5G0 923 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 HSPE1-MOB4S4R3N1 261 aa16.67■□□□□ 0.26
SS18-224ENST00000584083 SH2D1BO14796 132 aa16.66■□□□□ 0.26
SS18-224ENST00000584083 MAGEB3O15480 346 aa16.66■□□□□ 0.26
SS18-224ENST00000584083 ALX3O95076 343 aa16.66■□□□□ 0.26
SS18-224ENST00000584083 GNAO1P09471 354 aa16.66■□□□□ 0.26
SS18-224ENST00000584083 ZNF728P0DKX0 622 aa16.66■□□□□ 0.26
SS18-224ENST00000584083 RAB3AP20336 220 aa16.66■□□□□ 0.26
SS18-224ENST00000584083 CDK5R1Q15078 307 aa16.66■□□□□ 0.26
SS18-224ENST00000584083 KISS1Q15726 138 aa16.66■□□□□ 0.26
SS18-224ENST00000584083 SHISA2Q6UWI4 295 aa16.66■□□□□ 0.26
SS18-224ENST00000584083 ZNF782Q6ZMW2 699 aaPredicted RBP16.66■□□□□ 0.26
SS18-224ENST00000584083 C17orf107Q6ZR85 190 aa16.66■□□□□ 0.26
SS18-224ENST00000584083 SAXO1Q8IYX7 474 aa16.66■□□□□ 0.26
SS18-224ENST00000584083 OR52N4Q8NGI2 321 aa16.66■□□□□ 0.26
SS18-224ENST00000584083 PPP1R35Q8TAP8 253 aa16.66■□□□□ 0.26
SS18-224ENST00000584083 RGP1Q92546 391 aaPredicted RBP16.66■□□□□ 0.26
SS18-224ENST00000584083 DCLRE1BQ9H816 532 aa16.66■□□□□ 0.26
SS18-224ENST00000584083 EXOSC4Q9NPD3 245 aaKnown RBP16.66■□□□□ 0.26
SS18-224ENST00000584083 C17orf98A8MV24 154 aa16.65■□□□□ 0.26
SS18-224ENST00000584083 SIRPB1O00241 398 aa16.65■□□□□ 0.26
SS18-224ENST00000584083 KDM4BO94953 1096 aa16.65■□□□□ 0.26
SS18-224ENST00000584083 CD2P06729 351 aa16.65■□□□□ 0.26
SS18-224ENST00000584083 LGALS4P56470 323 aa16.65■□□□□ 0.26
SS18-224ENST00000584083 RPL15P61313 204 aaKnown RBP16.65■□□□□ 0.26
SS18-224ENST00000584083 MEF2CQ06413 473 aaPredicted RBP16.65■□□□□ 0.26
SS18-224ENST00000584083 SCN1BQ07699 218 aa16.65■□□□□ 0.26
SS18-224ENST00000584083 ST3GAL4Q11206 333 aa16.65■□□□□ 0.26
SS18-224ENST00000584083 TAF9Q16594 264 aa16.65■□□□□ 0.26
SS18-224ENST00000584083 SATL1Q86VE3 508 aa16.65■□□□□ 0.26
SS18-224ENST00000584083 OR4S1Q8NGB4 309 aa16.65■□□□□ 0.26
SS18-224ENST00000584083 GGHQ92820 318 aa16.65■□□□□ 0.26
SS18-224ENST00000584083 CPNE2Q96FN4 548 aaPredicted RBP16.65■□□□□ 0.26
SS18-224ENST00000584083 GPER1Q99527 375 aa16.65■□□□□ 0.26
SS18-224ENST00000584083 BEX1Q9HBH7 125 aa16.65■□□□□ 0.26
SS18-224ENST00000584083 TAS2R4Q9NYW5 299 aa16.65■□□□□ 0.26
SS18-224ENST00000584083 hADV38S2A0JD32 116 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 EFCAB10A6NFE3 127 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms