RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 H1FNTQ75WM6 255 aaPredicted RBP12.57□□□□□ -0.4
SMG6-215ENST00000574501 OR2AJ1Q8NGZ0 328 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 PIGTQ969N2 578 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 ACTR3CQ9C0K3 210 aaPredicted RBP12.57□□□□□ -0.4
SMG6-215ENST00000574501 METTL9Q9H1A3 318 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 DECR2Q9NUI1 292 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 SEC16AO15027 2179 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 SHISA8B8ZZ34 492 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 SSSCA1O60232 199 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 NXPH3O95157 252 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 KLF8O95600 359 aaPredicted RBP12.56□□□□□ -0.4
SMG6-215ENST00000574501 HOXA6P31267 233 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 MNX1P50219 401 aaPredicted RBP12.56□□□□□ -0.4
SMG6-215ENST00000574501 CARD17Q5XLA6 110 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 WDR25Q64LD2 544 aaPredicted RBP12.56□□□□□ -0.4
SMG6-215ENST00000574501 CMTM1Q8IZ96 169 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 ZNF283Q8N7M2 679 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 OR4D5Q8NGN0 318 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 OR1P1Q8NH06 330 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 GLRX2Q9NS18 164 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 CBLN4Q9NTU7 201 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 TBX21Q9UL17 535 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 TCFL5Q9UL49 500 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 A0A1B0GU03 582 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 NKX2-6A6NCS4 301 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 ZFP92A6NM28 416 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 H3BML4 177 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 TNFSF12O43508 249 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 SEMA4FO95754 770 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 APODP05090 189 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 OR1D4P47884 311 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 DYNLT3P51808 116 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 H3F3AP84243 136 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 P2RY6Q15077 328 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 MPV17LQ2QL34 196 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 FAM90A2PQ658T7 463 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 C9orf40Q8IXQ3 194 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 C20orf196Q8IYI0 205 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 LGI3Q8N145 548 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 NECAP1Q8NC96 275 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 RNASEH2CQ8TDP1 164 aaKnown RBP12.56□□□□□ -0.4
SMG6-215ENST00000574501 DKKL1Q9UK85 242 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 GAB2Q9UQC2 676 aa12.56□□□□□ -0.4
SMG6-215ENST00000574501 CFAP54Q96N23 3096 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 XKRY2A2RUG3 117 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 B4DEV8 164 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 PROB1E7EW31 1015 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 HSPA12AO43301 675 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 TSPAN2O60636 221 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 CYB5R3P00387 301 aaPredicted RBP12.55□□□□□ -0.4
SMG6-215ENST00000574501 MBP02144 154 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 OPN1LWP04000 364 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 AKT2P31751 481 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 ALDH3B1P43353 468 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 PPM1FP49593 454 aaPredicted RBP12.55□□□□□ -0.4
SMG6-215ENST00000574501 RND2P52198 227 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 HLA-DQA1Q5Y7H0 255 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 SP5Q6BEB4 398 aaPredicted RBP12.55□□□□□ -0.4
SMG6-215ENST00000574501 OR8G5Q8NG78 346 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 SPPL3Q8TCT6 385 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 ZNF721Q8TF20 911 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 CDH20Q9HBT6 801 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 VDAC3Q9Y277 283 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 SPAG17Q6Q759 2223 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 SHANK1Q9Y566 2161 aa12.55□□□□□ -0.4
SMG6-215ENST00000574501 PITX3O75364 302 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 DFFBO76075 338 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 FAHP16930 419 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 TUBG1P23258 451 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 GABREP78334 506 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 FOXF1Q12946 379 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 C1orf61Q13536 156 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 PPA1Q15181 289 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 DOK3Q7L591 496 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 DTX1Q86Y01 620 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 OR10A7Q8NGE5 316 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 OIT3Q8WWZ8 545 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 HIST1H2AAQ96QV6 131 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 TP53RKQ96S44 253 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 CDCA3Q99618 268 aaPredicted RBP12.54□□□□□ -0.4
SMG6-215ENST00000574501 MOB1AQ9H8S9 216 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 NECAP2Q9NVZ3 263 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 PPP1R14DQ9NXH3 145 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 MMACHCQ9Y4U1 282 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 SHISA7A6NL88 538 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 DDAH2O95865 285 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 HHEXQ03014 270 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 ZFP36L1Q07352 338 aaKnown RBP12.54□□□□□ -0.4
SMG6-215ENST00000574501 CLEC12BQ2HXU8 276 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 PRSS58Q8IYP2 241 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 TMEM252Q8N6L7 170 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 LRTM2Q8N967 370 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.54□□□□□ -0.4
SMG6-215ENST00000574501 RBMXL1Q96E39 390 aaKnown RBP12.54□□□□□ -0.4
SMG6-215ENST00000574501 GON4LQ3T8J9 2241 aa12.54□□□□□ -0.4
SMG6-215ENST00000574501 TDRD6O60522 2096 aaKnown RBP12.54□□□□□ -0.4
SMG6-215ENST00000574501 LOC102723971A0A1B0GUV8 181 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 BLACEA4D250 179 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 IFNL4K9M1U5 179 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms