RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 DSCAML1Q8TD84 2053 aa18.34■□□□□ 0.53
RAB40B-207ENST00000572603 NSD1Q96L73 2696 aaPredicted RBP18.33■□□□□ 0.53
RAB40B-207ENST00000572603 SLC17A2O00624 439 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 PHF1O43189 567 aaPredicted RBP18.33■□□□□ 0.52
RAB40B-207ENST00000572603 AIREO43918 545 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 CFPP27918 469 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 PRDX2P32119 198 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 TGFBR1P36897 503 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 GABRA2P47869 451 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 SNU13P55769 128 aaKnown RBP18.33■□□□□ 0.52
RAB40B-207ENST00000572603 RSU1Q15404 277 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 ESCO2Q56NI9 601 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 SPIN3Q5JUX0 258 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 AWAT2Q6E213 333 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 SLC16A12Q6ZSM3 486 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 SLC36A1Q7Z2H8 476 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 LINC01356Q8N9X3 169 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 OR51T1Q8NGJ9 327 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 OR6M1Q8NGM8 313 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 KCTD7Q96MP8 289 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 SSBP3Q9BWW4 388 aaPredicted RBP18.33■□□□□ 0.52
RAB40B-207ENST00000572603 ELL3Q9HB65 397 aaPredicted RBP18.33■□□□□ 0.52
RAB40B-207ENST00000572603 LPAR2Q9HBW0 351 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 MTORP42345 2549 aa18.33■□□□□ 0.52
RAB40B-207ENST00000572603 B4DSR2 109 aa18.32■□□□□ 0.52
RAB40B-207ENST00000572603 DVL1O14640 695 aa18.32■□□□□ 0.52
RAB40B-207ENST00000572603 CD5LO43866 347 aa18.32■□□□□ 0.52
RAB40B-207ENST00000572603 HAND1O96004 215 aa18.32■□□□□ 0.52
RAB40B-207ENST00000572603 MSMBP08118 114 aa18.32■□□□□ 0.52
RAB40B-207ENST00000572603 SERPINA2P20848 420 aa18.32■□□□□ 0.52
RAB40B-207ENST00000572603 DUSP1P28562 367 aa18.32■□□□□ 0.52
RAB40B-207ENST00000572603 IL13RA1P78552 427 aa18.32■□□□□ 0.52
RAB40B-207ENST00000572603 SLC22A6Q4U2R8 563 aa18.32■□□□□ 0.52
RAB40B-207ENST00000572603 NHLRC3Q5JS37 347 aa18.32■□□□□ 0.52
RAB40B-207ENST00000572603 DACT3Q96B18 629 aaPredicted RBP18.32■□□□□ 0.52
RAB40B-207ENST00000572603 NAA50Q9GZZ1 169 aaKnown RBP18.32■□□□□ 0.52
RAB40B-207ENST00000572603 KCNK15Q9H427 330 aa18.32■□□□□ 0.52
RAB40B-207ENST00000572603 CLN8Q9UBY8 286 aa18.32■□□□□ 0.52
RAB40B-207ENST00000572603 POLR3KQ9Y2Y1 108 aaPredicted RBP18.32■□□□□ 0.52
RAB40B-207ENST00000572603 V9GY05 133 aa18.32■□□□□ 0.52
RAB40B-207ENST00000572603 SMIM30A4D0T7 59 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 PDCD5O14737 125 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 ZNF737O75373 536 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 HTR3BO95264 441 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 LY6G6DO95868 133 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 RAB3BP20337 219 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 HTR2CP28335 458 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 BMXP51813 675 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 GNB2P62879 340 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 LCN2P80188 198 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 PAX2Q02962 417 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 IKZF1Q13422 519 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 PIGYQ3MUY2 71 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 CYB5R2Q6BCY4 276 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 Q6P435 159 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 FIP1L1Q6UN15 594 aaKnown RBP18.31■□□□□ 0.52
RAB40B-207ENST00000572603 BIVMQ86UB2 503 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 ZNRF1Q8ND25 227 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 TMEM104Q8NE00 496 aa18.31■□□□□ 0.52
RAB40B-207ENST00000572603 GSX1Q9H4S2 264 aaPredicted RBP18.31■□□□□ 0.52
RAB40B-207ENST00000572603 SONP18583 2426 aaKnown RBP18.31■□□□□ 0.52
RAB40B-207ENST00000572603 TMEM82A0PJX8 343 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 C22orf46C9J442 243 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 ZNF780AO75290 641 aaPredicted RBP18.3■□□□□ 0.52
RAB40B-207ENST00000572603 FOXH1O75593 365 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 GABARAPO95166 117 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 CLEC2LP0C7M8 214 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 SDC2P34741 201 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 NPY4RP50391 375 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 RBM11P57052 281 aaKnown RBP18.3■□□□□ 0.52
RAB40B-207ENST00000572603 COL10A1Q03692 680 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 IL13RA2Q14627 380 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 GPR141Q7Z602 305 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 ANKRD13BQ86YJ7 626 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 OSR2Q8N2R0 312 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 ZNF561Q8N587 486 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 MED30Q96HR3 178 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 S100A13Q99584 98 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 PLGRKTQ9HBL7 147 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 ZNF581Q9P0T4 197 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 GHRLQ9UBU3 117 aa18.3■□□□□ 0.52
RAB40B-207ENST00000572603 IFITM5A6NNB3 132 aa18.29■□□□□ 0.52
RAB40B-207ENST00000572603 UBBP0CG47 229 aa18.29■□□□□ 0.52
RAB40B-207ENST00000572603 VSIG8P0DPA2 414 aa18.29■□□□□ 0.52
RAB40B-207ENST00000572603 RPL5P46777 297 aaKnown RBP18.29■□□□□ 0.52
RAB40B-207ENST00000572603 LSM3P62310 102 aaKnown RBP18.29■□□□□ 0.52
RAB40B-207ENST00000572603 QRFPP83859 136 aa18.29■□□□□ 0.52
RAB40B-207ENST00000572603 UNC119Q13432 240 aa18.29■□□□□ 0.52
RAB40B-207ENST00000572603 P2RY14Q15391 338 aa18.29■□□□□ 0.52
RAB40B-207ENST00000572603 RAB11BQ15907 218 aa18.29■□□□□ 0.52
RAB40B-207ENST00000572603 TPRA1Q86W33 373 aa18.29■□□□□ 0.52
RAB40B-207ENST00000572603 TMEM185AQ8NFB2 350 aa18.29■□□□□ 0.52
RAB40B-207ENST00000572603 SCOCQ9UIL1 159 aa18.29■□□□□ 0.52
RAB40B-207ENST00000572603 NDUFB3O43676 98 aa18.28■□□□□ 0.52
RAB40B-207ENST00000572603 BPNT1O95861 308 aa18.28■□□□□ 0.52
RAB40B-207ENST00000572603 OR2H2O95918 312 aa18.28■□□□□ 0.52
RAB40B-207ENST00000572603 TGFAP01135 160 aa18.28■□□□□ 0.52
RAB40B-207ENST00000572603 CSTBP04080 98 aaKnown RBP18.28■□□□□ 0.52
RAB40B-207ENST00000572603 CHRM2P08172 466 aa18.28■□□□□ 0.52
RAB40B-207ENST00000572603 PSMD7P51665 324 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms