RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 SNU13P55769 128 aaKnown RBP13.41□□□□□ -0.26
USB1-215ENST00000569252 OR10A3P58181 314 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 FGF12P61328 243 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 ERVK11-1P61568 191 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 NCS1P62166 190 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 SCN1BQ07699 218 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 BLMHQ13867 455 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 P2RY14Q15391 338 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 FAM189A2Q15884 450 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 DGUOKQ16854 277 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 SPIN3Q5JUX0 258 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 ELP2Q6IA86 826 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 C1QL2Q7Z5L3 287 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 OR8B3Q8NGG8 313 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 OR10K1Q8NGX5 313 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 SPATA3Q8NHX4 192 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 KCNG3Q8TAE7 436 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 OR8B2Q96RD0 313 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 MRI1Q9BV20 369 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 DNTTIP1Q9H147 329 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 ZNF665Q9H7R5 613 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 HES4Q9HCC6 221 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 DAPK2Q9UIK4 370 aa13.41□□□□□ -0.26
USB1-215ENST00000569252 IGKV1-12A0A0C4DH73 117 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 SMIM30A4D0T7 59 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 DEGS1O15121 323 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 ADAM20O43506 726 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 NDUFB3O43676 98 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 CRLF1O75462 422 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 IGKV1D-12P01611 117 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 SFTPBP07988 381 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 CHRM2P08172 466 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 CD37P11049 281 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 PSG2P11465 335 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 SOX6P35712 828 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 RBMXP38159 391 aaKnown RBP13.4□□□□□ -0.26
USB1-215ENST00000569252 RPS19P39019 145 aaKnown RBP13.4□□□□□ -0.26
USB1-215ENST00000569252 RORCP51449 518 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 HNRNPA0Q13151 305 aaKnown RBP13.4□□□□□ -0.26
USB1-215ENST00000569252 CTF1Q16619 201 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 C2orf76Q3KRA6 126 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 IDNKQ5T6J7 187 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 SFXN4Q6P4A7 337 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 SLC16A12Q6ZSM3 486 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 PPP1R35Q8TAP8 253 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 FAM3DQ96BQ1 224 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 NAA50Q9GZZ1 169 aaKnown RBP13.4□□□□□ -0.26
USB1-215ENST00000569252 ST3GAL6Q9Y274 331 aa13.4□□□□□ -0.26
USB1-215ENST00000569252 SMIM31A0A1B0GVY4 71 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 SHISA3A0PJX4 238 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 CEACAM18A8MTB9 384 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 RNF212BA8MTL3 300 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 F8VVB4 439 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 F8VWA3 439 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 TGFBR1P36897 503 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 CAV3P56539 151 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 IL13RA1P78552 427 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 LOXL1Q08397 574 aaPredicted RBP13.39□□□□□ -0.27
USB1-215ENST00000569252 LRRC10Q5BKY1 277 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 CRIP3Q6Q6R5 217 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 LINC00596Q86U02 117 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 LYPD6Q86Y78 171 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 ZNF561Q8N587 486 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 OR51D1Q8NGF3 324 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 CLDND2Q8NHS1 167 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 SEH1LQ96EE3 360 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 NEIL1Q96FI4 390 aaPredicted RBP13.39□□□□□ -0.27
USB1-215ENST00000569252 CCL13Q99616 98 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 GFI1Q99684 422 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 URM1Q9BTM9 101 aaKnown RBP13.39□□□□□ -0.27
USB1-215ENST00000569252 SELENOIQ9C0D9 397 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 DCSTAMPQ9H295 470 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 LIN7BQ9HAP6 207 aa13.39□□□□□ -0.27
USB1-215ENST00000569252 PATZ1Q9HBE1 687 aaKnown RBP13.39□□□□□ -0.27
USB1-215ENST00000569252 IGHV4-61A0A0C4DH41 118 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.38□□□□□ -0.27
USB1-215ENST00000569252 MPIG6BO95866 241 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 HAND1O96004 215 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 CLEC2LP0C7M8 214 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 ZNF44P15621 663 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 DUSP1P28562 367 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 NPY4RP50391 375 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 CLDN12P56749 244 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 GNB2P62879 340 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 HOXA4Q00056 320 aaPredicted RBP13.38□□□□□ -0.27
USB1-215ENST00000569252 IKZF1Q13422 519 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 IL13RA2Q14627 380 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 ZNF146Q15072 292 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 ESCO2Q56NI9 601 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 ATPAF1Q5TC12 328 aaPredicted RBP13.38□□□□□ -0.27
USB1-215ENST00000569252 STUMQ69YW2 141 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 OR2W3Q7Z3T1 314 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 OR51T1Q8NGJ9 327 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 ANGPTL6Q8NI99 470 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 AP3S1Q92572 193 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 FAM46BQ96A09 425 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 SLC25A46Q96AG3 418 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 ISOC1Q96CN7 298 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 BANF2Q9H503 90 aa13.38□□□□□ -0.27
USB1-215ENST00000569252 CLN8Q9UBY8 286 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms