RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 GRK1Q15835 563 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 SLC35E4Q6ICL7 350 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 FDX2Q6P4F2 183 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 ZBTB49Q6ZSB9 765 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 LHFPL2Q6ZUX7 228 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 UTS2BQ765I0 119 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 TCF23Q7RTU1 214 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 RNF144BQ7Z419 303 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 Q8IYB0 196 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 C10orf67Q8IYJ2 551 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 FAM58AQ8N1B3 248 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 OR52N4Q8NGI2 321 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 SPSB1Q96BD6 273 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 MRPL48Q96GC5 212 aaKnown RBP9.68□□□□□ -0.86
HERC1-202ENST00000558324 SNX22Q96L94 193 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 ZNF714Q96N38 554 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 C16orf95Q9H693 158 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 SIGLEC9Q9Y336 463 aa9.68□□□□□ -0.86
HERC1-202ENST00000558324 IGKV1-12A0A0C4DH73 117 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 TRBV2A0A0J9YWF9 115 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 LOC100130705A0A1B0GUX0 176 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 C17orf98A8MV24 154 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 E9PI62 339 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 M0QZ24 198 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 TIMM23O14925 209 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 KCNAB3O43448 404 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 MPZL2O60487 215 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 PSPNO60542 156 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 TSPAN9O75954 239 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 CLPXO76031 633 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 IGKV1D-12P01611 117 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 IGHV1-8P0DP01 117 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 PEX2P28328 305 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 GABRA5P31644 462 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 CCR9P51686 369 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 PDZK1IP1Q13113 114 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 GALEQ14376 348 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 LPCAT4Q643R3 524 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 TRAPPC6BQ86SZ2 158 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 DYNAPQ8N1N2 210 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 OR4S1Q8NGB4 309 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 OR13D1Q8NGV5 346 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 PPP1R35Q8TAP8 253 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 TSEN15Q8WW01 171 aaKnown RBP9.67□□□□□ -0.86
HERC1-202ENST00000558324 Q96MT0 163 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 NKX3-1Q99801 234 aaPredicted RBP9.67□□□□□ -0.86
HERC1-202ENST00000558324 MEGF9Q9H1U4 602 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 FAM118AQ9NWS6 357 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 ERVK13-1Q9NX77 482 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 GSTK1Q9Y2Q3 226 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 TRRAPQ9Y4A5 3859 aa9.67□□□□□ -0.86
HERC1-202ENST00000558324 hADV38S2A0JD32 116 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 CHST1O43916 411 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 TSPAN15O95858 294 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 FADS2O95864 444 aaKnown RBP9.66□□□□□ -0.86
HERC1-202ENST00000558324 HCKP08631 526 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 RAB13P51153 203 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 SCN1BQ07699 218 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 FAM189A2Q15884 450 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 SSX2Q16385 188 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 SPIN3Q5JUX0 258 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 HIST2H2BDQ6DRA6 164 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 ASPHD2Q6ICH7 369 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 SYS1Q8N2H4 156 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 OR52I1Q8NGK6 324 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 OR4C13Q8NGP0 309 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 RHOXF1Q8NHV9 184 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 APH1BQ8WW43 257 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 PDCD1LG2Q9BQ51 273 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 COMMD4Q9H0A8 199 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 ZCCHC4Q9H5U6 513 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 HMG20AQ9NP66 347 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 EXOSC4Q9NPD3 245 aaKnown RBP9.66□□□□□ -0.86
HERC1-202ENST00000558324 ING3Q9NXR8 418 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 GLS2Q9UI32 602 aa9.66□□□□□ -0.86
HERC1-202ENST00000558324 MGAM2Q2M2H8 2515 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 ODF3BA8MYP8 253 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 MGST3O14880 152 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 ZFPL1O95159 310 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 OR2H2O95918 312 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 RBP4P02753 201 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 ZNF44P15621 663 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 JUNBP17275 347 aaPredicted RBP9.65□□□□□ -0.86
HERC1-202ENST00000558324 OR3A1P47881 315 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 SOX2P48431 317 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 GTF2A1P52655 376 aaPredicted RBP9.65□□□□□ -0.86
HERC1-202ENST00000558324 MEF2CQ06413 473 aaPredicted RBP9.65□□□□□ -0.86
HERC1-202ENST00000558324 RAB40BQ12829 278 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 ZNF146Q15072 292 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 SMN1Q16637 294 aaKnown RBP9.65□□□□□ -0.86
HERC1-202ENST00000558324 LRRC36Q1X8D7 754 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 LDLRAD2Q5SZI1 272 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 ZNF626Q68DY1 528 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 C11orf44Q8N8P7 122 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 ZNF555Q8NEP9 628 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 OR5AK2Q8NH90 309 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 STMN2Q93045 179 aa9.65□□□□□ -0.86
HERC1-202ENST00000558324 FOXRED1Q96CU9 486 aaPredicted RBP9.65□□□□□ -0.86
HERC1-202ENST00000558324 MYCBPQ99417 103 aaPredicted RBP9.65□□□□□ -0.86
HERC1-202ENST00000558324 ABCB10Q9NRK6 738 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms