RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 ADAM20O43506 726 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 RPS2P15880 293 aaKnown RBP10.67□□□□□ -0.7
SHMT2-227ENST00000557269 CFPP27918 469 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 SERPINB10P48595 397 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 PSMD7P51665 324 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 UNC119Q13432 240 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 SPCS2Q15005 226 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 ZNF146Q15072 292 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 DGUOKQ16854 277 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 C2orf76Q3KRA6 126 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 Q6P435 159 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 SFXN4Q6P4A7 337 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 ZNF788Q6ZQV5 615 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 SPICQ8N5J4 248 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 ZNRF1Q8ND25 227 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 OR51D1Q8NGF3 324 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 FAM3DQ96BQ1 224 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 S100A13Q99584 98 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 BARHL1Q9BZE3 327 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 RBM38Q9H0Z9 239 aaKnown RBP10.67□□□□□ -0.7
SHMT2-227ENST00000557269 RHOFQ9HBH0 211 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 STEAP1Q9UHE8 339 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 PCDHB10Q9UN67 800 aa10.67□□□□□ -0.7
SHMT2-227ENST00000557269 TMEM82A0PJX8 343 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 TMEM14DPA8MWL7 114 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 LDLRAD4O15165 306 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 PHF1O43189 567 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-227ENST00000557269 NDUFA2O43678 99 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 CRTAPO75718 401 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-227ENST00000557269 BPNT1O95861 308 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 HAND1O96004 215 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 IL1AP01583 271 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 CSTBP04080 98 aaKnown RBP10.66□□□□□ -0.7
SHMT2-227ENST00000557269 ARSBP15848 533 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 ZFP36P26651 326 aaKnown RBP10.66□□□□□ -0.7
SHMT2-227ENST00000557269 TMBIM6P55061 237 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 COL10A1Q03692 680 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 IKZF1Q13422 519 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 KCNJ8Q15842 424 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 OSR2Q8N2R0 312 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 OR51T1Q8NGJ9 327 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 SDSLQ96GA7 329 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 COX4I2Q96KJ9 171 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 LIN7BQ9HAP6 207 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 KAAG1Q9UBP8 84 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 GHRLQ9UBU3 117 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 MIOXQ9UGB7 285 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 DAPK2Q9UIK4 370 aa10.66□□□□□ -0.7
SHMT2-227ENST00000557269 TMEM272A0A1B0GTI8 110 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 DPPA5A6NC42 116 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 KIAA1324LA8MWY0 1029 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-227ENST00000557269 H3BMQ9 156 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 SIRPB1O00241 398 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 DVL1O14640 695 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 GEMIN2O14893 280 aaKnown RBP10.65□□□□□ -0.7
SHMT2-227ENST00000557269 SIGLEC5O15389 551 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 PSPNO60542 156 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 ZNF780AO75290 641 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-227ENST00000557269 ZNF737O75373 536 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 MPIG6BO95866 241 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 OR2H2O95918 312 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 UBBP0CG47 229 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 IGHV4-31P0DP07 118 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 GTF2F2P13984 249 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 SNRPBP14678 240 aaKnown RBP10.65□□□□□ -0.7
SHMT2-227ENST00000557269 MGMTP16455 207 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 PITPNBP48739 271 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 EFNB2P52799 333 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 RBM11P57052 281 aaKnown RBP10.65□□□□□ -0.7
SHMT2-227ENST00000557269 SCN1BQ07699 218 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 GPR176Q14439 515 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 TAF9Q16594 264 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 TMEM249Q2WGJ8 235 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 SPIN3Q5JUX0 258 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 IDNKQ5T6J7 187 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 BIVMQ86UB2 503 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 RTN4RL2Q86UN3 420 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 RAB2BQ8WUD1 216 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 ISOC1Q96CN7 298 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 NEIL1Q96FI4 390 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-227ENST00000557269 C1orf159Q96HA4 380 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 TMUB1Q9BVT8 246 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 SELENOIQ9C0D9 397 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 DNTTIP1Q9H147 329 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 DCSTAMPQ9H295 470 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 LPAR2Q9HBW0 351 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 OR5V1Q9UGF6 321 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 ST3GAL6Q9Y274 331 aa10.65□□□□□ -0.7
SHMT2-227ENST00000557269 A0A0A6YYD4 124 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 NKX6-3A6NJ46 265 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 SH2D1BO14796 132 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 DEGS1O15121 323 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 PAHP00439 452 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 BMXP51813 675 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 IL13RA1P78552 427 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 LCN2P80188 198 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 KRTAP1-1Q07627 177 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 NHLRC3Q5JS37 347 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 WDR25Q64LD2 544 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-227ENST00000557269 BRICD5Q6PL45 260 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms