RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 METTL11BQ5VVY1 283 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 ZSCAN4Q8NAM6 433 aaPredicted RBP18.84■□□□□ 0.61
TDP1-206ENST00000553569 UPRTQ96BW1 309 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 OCEL1Q9H607 264 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 CNTD2Q9H8S5 307 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 HMG20AQ9NP66 347 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 NOX4Q9NPH5 578 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 TOX4O94842 621 aa18.83■□□□□ 0.6
TDP1-206ENST00000553569 CHRM2P08172 466 aa18.83■□□□□ 0.6
TDP1-206ENST00000553569 MAPK3P27361 379 aaPredicted RBP18.83■□□□□ 0.6
TDP1-206ENST00000553569 ZNF93P35789 620 aaPredicted RBP18.83■□□□□ 0.6
TDP1-206ENST00000553569 OR3A4PP47883 348 aa18.83■□□□□ 0.6
TDP1-206ENST00000553569 SCGB2A2Q13296 93 aa18.83■□□□□ 0.6
TDP1-206ENST00000553569 ACSM3Q53FZ2 586 aa18.83■□□□□ 0.6
TDP1-206ENST00000553569 LY6G5BQ8NDX9 201 aa18.83■□□□□ 0.6
TDP1-206ENST00000553569 C22orf15Q8WYQ4 148 aa18.83■□□□□ 0.6
TDP1-206ENST00000553569 THRSPQ92748 146 aa18.83■□□□□ 0.6
TDP1-206ENST00000553569 WDFY2Q96P53 400 aa18.83■□□□□ 0.6
TDP1-206ENST00000553569 GSTK1Q9Y2Q3 226 aa18.83■□□□□ 0.6
TDP1-206ENST00000553569 PIN1P1O15428 100 aa18.82■□□□□ 0.6
TDP1-206ENST00000553569 RGS9O75916 674 aaPredicted RBP18.82■□□□□ 0.6
TDP1-206ENST00000553569 TK1P04183 234 aa18.82■□□□□ 0.6
TDP1-206ENST00000553569 MAS1P04201 325 aa18.82■□□□□ 0.6
TDP1-206ENST00000553569 IGHV4-38-2P0DP08 117 aa18.82■□□□□ 0.6
TDP1-206ENST00000553569 MLLT11Q13015 90 aaPredicted RBP18.82■□□□□ 0.6
TDP1-206ENST00000553569 ZNF367Q7RTV3 350 aa18.82■□□□□ 0.6
TDP1-206ENST00000553569 FAM185AQ8N0U4 392 aa18.82■□□□□ 0.6
TDP1-206ENST00000553569 MS4A15Q8N5U1 240 aa18.82■□□□□ 0.6
TDP1-206ENST00000553569 C8orf46Q8TAG6 207 aa18.82■□□□□ 0.6
TDP1-206ENST00000553569 TMEM203Q969S6 136 aa18.82■□□□□ 0.6
TDP1-206ENST00000553569 MGLLQ99685 303 aa18.82■□□□□ 0.6
TDP1-206ENST00000553569 ISYNA1Q9NPH2 558 aa18.82■□□□□ 0.6
TDP1-206ENST00000553569 GLS2Q9UI32 602 aa18.82■□□□□ 0.6
TDP1-206ENST00000553569 NUP50Q9UKX7 468 aa18.82■□□□□ 0.6
TDP1-206ENST00000553569 GPX5O75715 221 aa18.81■□□□□ 0.6
TDP1-206ENST00000553569 MMP9P14780 707 aa18.81■□□□□ 0.6
TDP1-206ENST00000553569 RPS25P62851 125 aaKnown RBP18.81■□□□□ 0.6
TDP1-206ENST00000553569 GPR50Q13585 617 aa18.81■□□□□ 0.6
TDP1-206ENST00000553569 SPIN3Q5JUX0 258 aa18.81■□□□□ 0.6
TDP1-206ENST00000553569 FAM27D1Q5T7N8 215 aa18.81■□□□□ 0.6
TDP1-206ENST00000553569 PXT1Q8NFP0 134 aa18.81■□□□□ 0.6
TDP1-206ENST00000553569 OR4M1Q8NGD0 313 aa18.81■□□□□ 0.6
TDP1-206ENST00000553569 OR10K1Q8NGX5 313 aa18.81■□□□□ 0.6
TDP1-206ENST00000553569 TBX15Q96SF7 602 aa18.81■□□□□ 0.6
TDP1-206ENST00000553569 SLC6A7Q99884 636 aa18.81■□□□□ 0.6
TDP1-206ENST00000553569 SIRPDQ9H106 197 aa18.81■□□□□ 0.6
TDP1-206ENST00000553569 EXOSC4Q9NPD3 245 aaKnown RBP18.81■□□□□ 0.6
TDP1-206ENST00000553569 ACOT13Q9NPJ3 140 aa18.81■□□□□ 0.6
TDP1-206ENST00000553569 C19orf12Q9NSK7 152 aa18.81■□□□□ 0.6
TDP1-206ENST00000553569 FOXJ3Q9UPW0 622 aa18.81■□□□□ 0.6
TDP1-206ENST00000553569 TRBV23-1A0A0A0MS06 115 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 TMEM82A0PJX8 343 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 K7N7A8 449 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 SIRPB1O00241 398 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 ZNF737O75373 536 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 GABRR1P24046 479 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 PTGFRP43088 359 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 SRSF2Q01130 221 aaKnown RBP18.8■□□□□ 0.6
TDP1-206ENST00000553569 TPBGQ13641 420 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 ZNF146Q15072 292 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 RSU1Q15404 277 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 CMTM4Q8IZR5 234 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 BPIFB2Q8N4F0 458 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 JAGN1Q8N5M9 183 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 CHST6Q9GZX3 395 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 FAM234AQ9H0X4 552 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 RHOFQ9HBH0 211 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 ZNF69Q9UC07 566 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 ING4Q9UNL4 249 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 KPTNQ9Y664 436 aa18.8■□□□□ 0.6
TDP1-206ENST00000553569 CDRT1O95170 752 aa18.79■□□□□ 0.6
TDP1-206ENST00000553569 CPEP16870 476 aa18.79■□□□□ 0.6
TDP1-206ENST00000553569 MTNR1BP49286 362 aa18.79■□□□□ 0.6
TDP1-206ENST00000553569 RPL31P62899 125 aaKnown RBP18.79■□□□□ 0.6
TDP1-206ENST00000553569 EDDM3AQ14507 147 aa18.79■□□□□ 0.6
TDP1-206ENST00000553569 UNQ9370/PRO34162Q6UXP9 181 aa18.79■□□□□ 0.6
TDP1-206ENST00000553569 VMO1Q7Z5L0 202 aa18.79■□□□□ 0.6
TDP1-206ENST00000553569 CEACAM19Q7Z692 300 aa18.79■□□□□ 0.6
TDP1-206ENST00000553569 SVOPQ8N4V2 548 aa18.79■□□□□ 0.6
TDP1-206ENST00000553569 NR1H4Q96RI1 486 aaPredicted RBP18.79■□□□□ 0.6
TDP1-206ENST00000553569 YTHDF1Q9BYJ9 559 aaKnown RBP18.79■□□□□ 0.6
TDP1-206ENST00000553569 CUBNO60494 3623 aa18.79■□□□□ 0.6
TDP1-206ENST00000553569 SH2D1BO14796 132 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 MRPS14O60783 128 aaKnown RBP18.78■□□□□ 0.6
TDP1-206ENST00000553569 HTR3BO95264 441 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 OR2H2O95918 312 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 EDDM3BP56851 147 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 EMX1Q04741 257 aaPredicted RBP18.78■□□□□ 0.6
TDP1-206ENST00000553569 SCN1BQ07699 218 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 KRTAP21-3Q3LHN1 58 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 GPR157Q5UAW9 335 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 PHC2Q8IXK0 858 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 OR8H2Q8N162 312 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 KIR3DL3Q8N743 410 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 LHX4Q969G2 390 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 MUL1Q969V5 352 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 SNX22Q96L94 193 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 S100A13Q99584 98 aa18.78■□□□□ 0.6
TDP1-206ENST00000553569 MS4A7Q9GZW8 240 aaPredicted RBP18.78■□□□□ 0.6
TDP1-206ENST00000553569 METTL9Q9H1A3 318 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms