RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 OR51F2Q8NH61 342 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 OR51H1Q8NH63 302 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ACER1Q8TDN7 264 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 DOK4Q8TEW6 326 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 RTN4IP1Q8WWV3 396 aaPredicted RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 TM4SF18Q96CE8 201 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 PACRGQ96M98 296 aaPredicted RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 AICDAQ9GZX7 198 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 CYSTM1Q9H1C7 97 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 RNF122Q9H9V4 155 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 TREM2Q9NZC2 230 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 KCNIP1Q9NZI2 227 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 COMMD9Q9P000 198 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ENOPH1Q9UHY7 261 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 PSG11Q9UQ72 335 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 S4R3C0 116 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 CFTRP13569 1480 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 LRRC9Q6ZRR7 1453 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ABCC3O15438 1527 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 PSME4Q14997 1843 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 SBF2Q86WG5 1849 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 PLXNA3P51805 1871 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 NYNRINQ9P2P1 1898 aaKnown RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 LOC102724200A0A096LPH7 203 aaPredicted RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF816-ZNF321PA0A0X1KG74 233 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 LRCOL1A6NCL2 159 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 GJE1A6NN92 205 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 LAD1O00515 517 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 REM1O75628 298 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 GLSO94925 669 aaPredicted RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 HLA-DQA1P01909 254 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 KLK3P07288 261 aaPredicted RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 KRT16P08779 473 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 UBCP0CG48 685 aaKnown RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ERGP11308 486 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ELK1P19419 428 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 CNTFRP26992 372 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 HSD11B1P28845 292 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 SLC6A1P30531 599 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 BCAP31P51572 246 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF138P52744 262 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 AP1S2P56377 157 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 HOXC5Q00444 222 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 C2orf80Q0P641 193 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 PNOCQ13519 176 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ENDOGQ14249 297 aaKnown RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 KIAA0087Q14695 138 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 SYCP1Q15431 976 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 NSDHLQ15738 373 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ANKRD22Q5VYY1 191 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 FAM71E1Q6IPT2 247 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 Q6ZN92 141 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 SLC30A8Q8IWU4 369 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 CHST4Q8NCG5 386 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 CA5BP1Q8WTZ4 195 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ORAOV1Q8WV07 137 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 NDRG1Q92597 394 aaKnown RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 CCDC124Q96CT7 223 aaKnown RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 RBMXL1Q96E39 390 aaKnown RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 SGTBQ96EQ0 304 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 HSFY1Q96LI6 401 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 C18orf15Q96N68 181 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF717Q9BY31 904 aaPredicted RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 GNB1LQ9BYB4 327 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 OR51V1Q9H2C8 321 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 INIPQ9NRY2 104 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 MRPL22Q9NWU5 206 aaKnown RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 SLC25A37Q9NYZ2 338 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 B4GALT7Q9UBV7 327 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 CD84Q9UIB8 345 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 CLEC4EQ9ULY5 219 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ING4Q9UNL4 249 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 OR51B2Q9Y5P1 312 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 NPATQ14207 1427 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 CNTLNQ9NXG0 1405 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ADGRB3O60242 1522 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 N4BP2Q86UW6 1770 aaPredicted RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 LOXHD1Q8IVV2 1947 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 BCKDKO14874 412 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 LDOC1O95751 146 aaPredicted RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 HAND1O96004 215 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 IGKV3-15P01624 115 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 RPN2P04844 631 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 PGA4P0DJD7 388 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 PGA3P0DJD8 388 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF250P15622 560 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 RAB4AP20338 218 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 RPA3P35244 121 aaPredicted RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ARL2P36404 184 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 RPS10P46783 165 aaKnown RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 INPP1P49441 399 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 AQP4P55087 323 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 KRTAP10-3P60369 221 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 RPS21P63220 83 aaKnown RBP0.66□□□□□ -2.3
HIF1A-204ENST00000539097 LCN2P80188 198 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 COTL1Q14019 142 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 RGNQ15493 299 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF79Q15937 498 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 GCSAMLQ5JQS6 135 aa0.66□□□□□ -2.3
HIF1A-204ENST00000539097 CPTPQ5TA50 214 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms