RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 JOSD1Q15040 202 aaPredicted RBP3.85□□□□□ -1.79
NIPBL-206ENST00000509429 RAB35Q15286 201 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 C3AR1Q16581 482 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 TCTN1Q2MV58 587 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF672Q499Z4 452 aaPredicted RBP3.85□□□□□ -1.79
NIPBL-206ENST00000509429 ACSF3Q4G176 576 aaPredicted RBP3.85□□□□□ -1.79
NIPBL-206ENST00000509429 UNC50Q53HI1 259 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 C19orf54Q5BKX5 351 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 CT45A2Q5DJT8 189 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 CLEC12AQ5QGZ9 265 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 ZFAND6Q6FIF0 208 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 DUX4L9Q6RFH8 374 aaPredicted RBP3.85□□□□□ -1.79
NIPBL-206ENST00000509429 ANKRD33Q7Z3H0 272 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 AMIGO2Q86SJ2 522 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.85□□□□□ -1.79
NIPBL-206ENST00000509429 FBXO16Q8IX29 292 aaPredicted RBP3.85□□□□□ -1.79
NIPBL-206ENST00000509429 SVBPQ8N300 66 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 PARP16Q8N5Y8 322 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 GCSAMQ8N6F7 178 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 EID2Q8N6I1 236 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 TSTD1Q8NFU3 115 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 OR52L1Q8NGH7 329 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 OR4C13Q8NGP0 309 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 OR2AJ1Q8NGZ0 328 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 VN1R17PQ8TDU5 208 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 HIST1H2ACQ93077 130 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 PYCR2Q96C36 320 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 LRRC58Q96CX6 371 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 SLC35E1Q96K37 410 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 IL17FQ96PD4 163 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 NEDD4LQ96PU5 975 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 ATOH8Q96SQ7 321 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 VKORC1Q9BQB6 163 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 PITPNM3Q9BZ71 974 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 CDC42EP4Q9H3Q1 356 aaKnown RBP3.85□□□□□ -1.79
NIPBL-206ENST00000509429 CDCP1Q9H5V8 836 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 PRORYQ9H606 182 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 SLC52A3Q9NQ40 469 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 GDF3Q9NR23 364 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 UBQLN4Q9NRR5 601 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 DMAC2Q9NW81 257 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 MRPL16Q9NX20 251 aaKnown RBP3.85□□□□□ -1.79
NIPBL-206ENST00000509429 FAM206AQ9NX38 181 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 MRPL27Q9P0M9 148 aaKnown RBP3.85□□□□□ -1.79
NIPBL-206ENST00000509429 DUX4Q9UBX2 424 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 NAT8Q9UHE5 227 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 NAT8BQ9UHF3 227 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 TRAPPC2LQ9UL33 140 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 RCL1Q9Y2P8 373 aaKnown RBP3.85□□□□□ -1.79
NIPBL-206ENST00000509429 LAMTOR2Q9Y2Q5 125 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 OR51B2Q9Y5P1 312 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 ATAD5Q96QE3 1844 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 CACNA1SQ13698 1873 aa3.85□□□□□ -1.79
NIPBL-206ENST00000509429 COL1A1P02452 1464 aaPredicted RBP3.85□□□□□ -1.79
NIPBL-206ENST00000509429 COL24A1Q17RW2 1714 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 MYH7BA7E2Y1 1941 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 A0A1W2PPI3 338 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 ANKRD20A5PA0PJZ0 165 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 OR5H15A6NDH6 313 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 FAM166BA8MTA8 275 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 IDSB3KWA1 339 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 D6RAR5 112 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 H0YL77 283 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 H3BTX0 84 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 HMGB3O15347 200 aaKnown RBP3.84□□□□□ -1.79
NIPBL-206ENST00000509429 HCRTR1O43613 425 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 ATP6AP2O75787 350 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 TRAPPC6AO75865 159 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 MPC2O95563 127 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 GLUD1P00367 558 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 NRASP01111 189 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 HBZP02008 142 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 SEMG1P04279 462 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 IGF1P05019 195 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 DBIP07108 87 aaKnown RBP3.84□□□□□ -1.79
NIPBL-206ENST00000509429 TACSTD2P09758 323 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 HSD17B1P14061 328 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 GATA1P15976 413 aaPredicted RBP3.84□□□□□ -1.79
NIPBL-206ENST00000509429 PSMB1P20618 241 aaKnown RBP3.84□□□□□ -1.79
NIPBL-206ENST00000509429 CHATP28329 748 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 ZFP36L2P47974 494 aaKnown RBP3.84□□□□□ -1.79
NIPBL-206ENST00000509429 XGP55808 180 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 ST3GAL4Q11206 333 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF154Q13106 437 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 RUNX3Q13761 415 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 P2RY6Q15077 328 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 PMVKQ15126 192 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF284Q2VY69 593 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 TRMT12Q53H54 448 aaKnown RBP3.84□□□□□ -1.79
NIPBL-206ENST00000509429 TREML2Q5T2D2 321 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 OTPQ5XKR4 325 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 B3GNTL1Q67FW5 361 aaPredicted RBP3.84□□□□□ -1.79
NIPBL-206ENST00000509429 TMEM215Q68D42 235 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 FAAP20Q6NZ36 180 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 TBPL2Q6SJ96 375 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 CHMP1BQ7LBR1 199 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF720Q7Z2F6 126 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 SLC35E3Q7Z769 313 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 HAPLN4Q86UW8 402 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms