RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 EIF1P41567 113 aaKnown RBP3.39□□□□□ -1.87
CLTC-209ENST00000498711 RAB5CP51148 216 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 EMP2P54851 167 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 TAS2R46P59540 309 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 SUMO2P61956 95 aaKnown RBP3.39□□□□□ -1.87
CLTC-209ENST00000498711 POLR2GP62487 172 aaKnown RBP eCLIP3.39□□□□□ -1.87
CLTC-209ENST00000498711 HSF1Q00613 529 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 OR7A5Q15622 319 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 NNATQ16517 81 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 SRSF7Q16629 238 aaKnown RBP eCLIP3.39□□□□□ -1.877e-7■□□□□ 9.4
CLTC-209ENST00000498711 ODF4Q2M2E3 257 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 DEFB110Q30KQ9 67 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 RPL7L1Q6DKI1 246 aaKnown RBP3.39□□□□□ -1.87
CLTC-209ENST00000498711 TMEM88Q6PEY1 159 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 GLIPR1L1Q6UWM5 242 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 RD3Q7Z3Z2 195 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 JAGN1Q8N5M9 183 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 OR6X1Q8NH79 312 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 TMED6Q8WW62 240 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 TMEM234Q8WY98 164 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 ROBO4Q8WZ75 1007 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 TMEM54Q969K7 222 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 INTS12Q96CB8 462 aaKnown RBP3.39□□□□□ -1.87
CLTC-209ENST00000498711 RAB3CQ96E17 227 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 MMABQ96EY8 250 aaPredicted RBP3.39□□□□□ -1.87
CLTC-209ENST00000498711 TGM7Q96PF1 710 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 MICU1Q9BPX6 476 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 LRRC61Q9BV99 259 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 ZNF768Q9H5H4 540 aaKnown RBP3.39□□□□□ -1.87
CLTC-209ENST00000498711 WFDC1Q9HC57 220 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 GSN-AS1Q9NRJ2 163 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 ZNF319Q9P2F9 582 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 MRPS28Q9Y2Q9 187 aaKnown RBP3.39□□□□□ -1.87
CLTC-209ENST00000498711 STRAPQ9Y3F4 350 aaKnown RBP3.39□□□□□ -1.87
CLTC-209ENST00000498711 EXPH5Q8NEV8 1989 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 FREM2Q5SZK8 3169 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 IGHV5-51A0A0C4DH38 117 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 A0A0U1RQV5 110 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 C5orf51A6NDU8 294 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 C17orf51A8MQB3 221 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 NPIPB5A8MRT5 1133 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 SERPINE3A8MV23 424 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 KCNAB3O43448 404 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 SYT7O43581 403 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 HCRTR2O43614 444 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 GPR137BO60478 399 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 ZNF354AO60765 605 aaPredicted RBP3.39□□□□□ -1.87
CLTC-209ENST00000498711 ADAP1O75689 374 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 SEMA4FO95754 770 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 WNT2P09544 360 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 SLC2A1P11166 492 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 PAX1P15863 534 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 AKR1C4P17516 323 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 ACKR3P25106 362 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 RPL35P42766 123 aaKnown RBP3.39□□□□□ -1.87
CLTC-209ENST00000498711 HTR5AP47898 357 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 RAB5BP61020 215 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 LSM6P62312 80 aaKnown RBP3.39□□□□□ -1.87
CLTC-209ENST00000498711 C17orf67Q0P5P2 114 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 TMEM187Q14656 261 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 RHEBQ15382 184 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 RSPO1Q2MKA7 263 aaPredicted RBP3.39□□□□□ -1.87
CLTC-209ENST00000498711 C10orf128Q5T292 105 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 ZNF585AQ6P3V2 769 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 Q6ZS49 121 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 COX15Q7KZN9 410 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 KCTD9Q7L273 389 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 FAM71E2Q8N5Q1 922 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 TMEM116Q8NCL8 245 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 TMEM104Q8NE00 496 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 OR8B12Q8NGG6 310 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 TSLPQ969D9 159 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 R3HDM4Q96D70 268 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 LYZL4Q96KX0 146 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 NKX3-1Q99801 234 aaPredicted RBP3.39□□□□□ -1.87
CLTC-209ENST00000498711 TCEAL7Q9BRU2 100 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 ANGPTL4Q9BY76 406 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 SAP30LQ9HAJ7 183 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 TAF9BQ9HBM6 251 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 TINAGQ9UJW2 476 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 MEMO1Q9Y316 297 aa3.39□□□□□ -1.87
CLTC-209ENST00000498711 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.39□□□□□ -1.87
CLTC-209ENST00000498711 TRGV11A0A075B6L2 103 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 A0A087WWC5 75 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 CLEC18AA5D8T8 446 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 DHRS7CA6NNS2 312 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 TMEM150CB9EJG8 249 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 ZNF878C9JN71 531 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 K7N7A8 449 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 GATCO43716 136 aaKnown RBP3.38□□□□□ -1.87
CLTC-209ENST00000498711 PRKNO60260 465 aaPredicted RBP3.38□□□□□ -1.87
CLTC-209ENST00000498711 HLA-DQA2P01906 255 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 IFNA6P05013 189 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 HOXB5P09067 269 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 OR8U8P0C7N1 319 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 IGFBP2P18065 325 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 HOXA5P20719 270 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 ANOS1P23352 680 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 GLRA1P23415 457 aa3.38□□□□□ -1.87
CLTC-209ENST00000498711 DTYMKP23919 212 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms