RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 SIGLEC5O15389 551 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 HAND1O96004 215 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 TFF1P04155 84 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 SFTPBP07988 381 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 JUNBP17275 347 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-219ENST00000488186 DUSP1P28562 367 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 CEBPDP49716 269 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-219ENST00000488186 SCN1BQ07699 218 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 TIMM50Q3ZCQ8 353 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 SLC22A6Q4U2R8 563 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 SPIN3Q5JUX0 258 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 CD200R1LQ6Q8B3 271 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 BTNL3Q6UXE8 466 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 ZNF841Q6ZN19 808 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 C1QL2Q7Z5L3 287 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 LRRTM1Q86UE6 522 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 CD177Q8N6Q3 437 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 ASCC1Q8N9N2 400 aaKnown RBP13.09□□□□□ -0.31
C9orf3-219ENST00000488186 ZNRF1Q8ND25 227 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 OR4M2Q8NGB6 313 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 OR10K1Q8NGX5 313 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 H1FXQ92522 213 aaKnown RBP13.09□□□□□ -0.31
C9orf3-219ENST00000488186 SDSLQ96GA7 329 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 CHCHD6Q9BRQ6 235 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 MRPS26Q9BYN8 205 aaKnown RBP13.09□□□□□ -0.31
C9orf3-219ENST00000488186 OR51E2Q9H255 320 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 PLGRKTQ9HBL7 147 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 TMEM160Q9NX00 188 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 AK6Q9Y3D8 172 aaKnown RBP13.09□□□□□ -0.31
C9orf3-219ENST00000488186 ABCA2Q9BZC7 2435 aa13.09□□□□□ -0.31
C9orf3-219ENST00000488186 GPR37O15354 613 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 ECDO95905 644 aaPredicted RBP13.08□□□□□ -0.32
C9orf3-219ENST00000488186 ADRA2CP18825 462 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 SERPINA2P20848 420 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 GATA3P23771 443 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 GABRR1P24046 479 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 FGF12P61328 243 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 COL10A1Q03692 680 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 CRIP3Q6Q6R5 217 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 BTN2A1Q7KYR7 527 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 OSR2Q8N2R0 312 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 PPP1R35Q8TAP8 253 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 TXNL4BQ9NX01 149 aaKnown RBP13.08□□□□□ -0.32
C9orf3-219ENST00000488186 GHRLQ9UBU3 117 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 ZNF222Q9UK12 451 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 NF1P21359 2839 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 DOCK11Q5JSL3 2073 aa13.08□□□□□ -0.32
C9orf3-219ENST00000488186 TRAV1-2A0A0B4J238 106 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 A0A1B0GW55 424 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 TRIM64CA6NLI5 447 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 A8MXK9 166 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 DEGS1O15121 323 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 DUX4L2P0CJ85 424 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 DUX4L3P0CJ86 424 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 DUX4L4P0CJ87 422 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 DUX4L5P0CJ88 424 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 DUX4L6P0CJ89 424 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 DUX4L7P0CJ90 424 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 GTF2F2P13984 249 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 SELLP14151 372 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 ZNF44P15621 663 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 AMY2BP19961 511 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 HNF1AP20823 631 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 GADD45AP24522 165 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 HTR2CP28335 458 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 FGF9P31371 208 aaPredicted RBP13.07□□□□□ -0.32
C9orf3-219ENST00000488186 RIPPLY3P57055 190 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 ZNF146Q15072 292 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 DGUOKQ16854 277 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 C11orf91Q3C1V1 193 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 ELP2Q6IA86 826 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 DUX4L9Q6RFH8 374 aaPredicted RBP13.07□□□□□ -0.32
C9orf3-219ENST00000488186 ASCL4Q6XD76 172 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 OR5D13Q8NGL4 314 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 TBC1D15Q8TC07 691 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 RAB40AQ8WXH6 277 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 KCTD7Q96MP8 289 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 NUDT16L1Q9BRJ7 211 aaKnown RBP13.07□□□□□ -0.32
C9orf3-219ENST00000488186 MRI1Q9BV20 369 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 IL36GQ9NZH8 169 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 IL36RNQ9UBH0 155 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 DUX4Q9UBX2 424 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 MAB21L2Q9Y586 359 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 V9GY05 133 aa13.07□□□□□ -0.32
C9orf3-219ENST00000488186 NAV3Q8IVL0 2385 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 PPIAL4CA0A0B4J2A2 164 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 KIAA1324LA8MWY0 1029 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-219ENST00000488186 SIRPB1O00241 398 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 ENSAO43768 121 aaKnown RBP13.06□□□□□ -0.32
C9orf3-219ENST00000488186 CRTAPO75718 401 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-219ENST00000488186 UBBP0CG47 229 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 RAB3BP20337 219 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 CAV3P56539 151 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 RAB11BQ15907 218 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 GDPD3Q7L5L3 318 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 OR4D6Q8NGJ1 314 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 OR6M1Q8NGM8 313 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 SNX22Q96L94 193 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 SHARPINQ9H0F6 387 aa13.06□□□□□ -0.32
C9orf3-219ENST00000488186 CST11Q9H112 138 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms