RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 LDLRAD4O15165 306 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 ZNF780AO75290 641 aaPredicted RBP11.8□□□□□ -0.52
SRSF6-202ENST00000483871 UBBP0CG47 229 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 GTF2F2P13984 249 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 MUC1P15941 1255 aaPredicted RBP11.8□□□□□ -0.52
SRSF6-202ENST00000483871 NR4A2P43354 598 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 GABRA2P47869 451 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 SCN1BQ07699 218 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 GPR176Q14439 515 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 TAF9Q16594 264 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 SMIM21Q3B7S5 101 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 STUMQ69YW2 141 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 PRSS57Q6UWY2 283 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 OR51T1Q8NGJ9 327 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 ANGPTL6Q8NI99 470 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 LGALS14Q8TCE9 139 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 CYYR1Q96J86 154 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 CCL13Q99616 98 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 NICN1Q9BSH3 213 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 SELENOIQ9C0D9 397 aa11.8□□□□□ -0.52
SRSF6-202ENST00000483871 KNG1P01042 644 aa11.79□□□□□ -0.52
SRSF6-202ENST00000483871 CSF3P09919 207 aa11.79□□□□□ -0.52
SRSF6-202ENST00000483871 PRDX2P32119 198 aa11.79□□□□□ -0.52
SRSF6-202ENST00000483871 MDH2P40926 338 aaKnown RBP11.79□□□□□ -0.52
SRSF6-202ENST00000483871 ZNF146Q15072 292 aa11.79□□□□□ -0.52
SRSF6-202ENST00000483871 BIVMQ86UB2 503 aa11.79□□□□□ -0.52
SRSF6-202ENST00000483871 KCNG3Q8TAE7 436 aa11.79□□□□□ -0.52
SRSF6-202ENST00000483871 CST11Q9H112 138 aa11.79□□□□□ -0.52
SRSF6-202ENST00000483871 RHOFQ9HBH0 211 aa11.79□□□□□ -0.52
SRSF6-202ENST00000483871 BATF3Q9NR55 127 aa11.79□□□□□ -0.52
SRSF6-202ENST00000483871 IGHV4-61A0A0C4DH41 118 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 CEACAM18A8MTB9 384 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 TMPRSS2O15393 492 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 SELLP14151 372 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 GABRR1P24046 479 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 RBM11P57052 281 aaKnown RBP11.78□□□□□ -0.52
SRSF6-202ENST00000483871 DSCR9P59020 149 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 SHEQ5VZ18 495 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 CROCCP3Q8IVE0 287 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 ZNRF1Q8ND25 227 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 Q96M66 194 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 TMEM59Q9BXS4 323 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 LPAR5Q9H1C0 372 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 PCDHB16Q9NRJ7 776 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 COMMD3Q9UBI1 195 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 ZNF222Q9UK12 451 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 MAB21L2Q9Y586 359 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 SVEP1Q4LDE5 3571 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 SETXQ7Z333 2677 aaKnown RBP11.78□□□□□ -0.52
SRSF6-202ENST00000483871 A0A0A6YYD4 124 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 ADAM20O43506 726 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 FCN3O75636 299 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 FSTL3O95633 263 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 OR2H2O95918 312 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 HAND1O96004 215 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 SOX6P35712 828 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 CAPZA1P52907 286 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 RPS27AP62979 156 aaKnown RBP11.78□□□□□ -0.52
SRSF6-202ENST00000483871 COL10A1Q03692 680 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 Q6P435 159 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 ZNF788Q6ZQV5 615 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 OR2W3Q7Z3T1 314 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 FGFRL1Q8N441 504 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 FAM216BQ8N7L0 139 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 MAPK1IP1LQ8NDC0 245 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 CLDND2Q8NHS1 167 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 MRPS24Q96EL2 167 aaKnown RBP11.78□□□□□ -0.52
SRSF6-202ENST00000483871 SLIRPQ9GZT3 109 aaKnown RBP11.78□□□□□ -0.52
SRSF6-202ENST00000483871 ABRACLQ9P1F3 81 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 CTSZQ9UBR2 303 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 SPATA2Q9UM82 520 aa11.78□□□□□ -0.52
SRSF6-202ENST00000483871 RNF223E7ERA6 249 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 SIRPB1O00241 398 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 OR7C1O76099 320 aaPredicted RBP11.77□□□□□ -0.53
SRSF6-202ENST00000483871 ZNF44P15621 663 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 IL2RGP31785 369 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 BMXP51813 675 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 SEC61A1P61619 476 aaKnown RBP11.77□□□□□ -0.53
SRSF6-202ENST00000483871 IKZF1Q13422 519 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 TMEM155Q4W5P6 130 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 ATPAF1Q5TC12 328 aaPredicted RBP11.77□□□□□ -0.53
SRSF6-202ENST00000483871 SIGIRRQ6IA17 410 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 BRICD5Q6PL45 260 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 FIP1L1Q6UN15 594 aaKnown RBP11.77□□□□□ -0.53
SRSF6-202ENST00000483871 DCDC5Q6ZRR9 648 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 RTN4RL2Q86UN3 420 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 MUC20Q8N307 709 aaPredicted RBP11.77□□□□□ -0.53
SRSF6-202ENST00000483871 GAFA1Q96PS6 74 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 RAB22AQ9UL26 194 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 PCDHB10Q9UN67 800 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 ARHGAP32A7KAX9 2087 aa11.77□□□□□ -0.53
SRSF6-202ENST00000483871 DOCK11Q5JSL3 2073 aa11.76□□□□□ -0.53
SRSF6-202ENST00000483871 A0A096LNT2 108 aa11.76□□□□□ -0.53
SRSF6-202ENST00000483871 HSPB6O14558 160 aa11.76□□□□□ -0.53
SRSF6-202ENST00000483871 SH2D1BO14796 132 aa11.76□□□□□ -0.53
SRSF6-202ENST00000483871 DEGS1O15121 323 aa11.76□□□□□ -0.53
SRSF6-202ENST00000483871 SOCS1O15524 211 aa11.76□□□□□ -0.53
SRSF6-202ENST00000483871 PSPNO60542 156 aa11.76□□□□□ -0.53
SRSF6-202ENST00000483871 WNT2P09544 360 aa11.76□□□□□ -0.53
SRSF6-202ENST00000483871 SLC25A16P16260 332 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms