RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 GAFA1Q96PS6 74 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 MRI1Q9BV20 369 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 PPIL3Q9H2H8 161 aaKnown RBP14.59□□□□□ -0.07
PTPN7-209ENST00000477554 NEK6Q9HC98 313 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 ABCB9Q9NP78 766 aa14.59□□□□□ -0.07
PTPN7-209ENST00000477554 IGKV1D-17A0A075B6S4 117 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 PQLC2LA1A4F0 135 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 ANKRD61A6NGH8 418 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 H3BMQ9 156 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 ALX3O95076 343 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 MMP9P14780 707 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 IGFBP3P17936 291 aaPredicted RBP14.58□□□□□ -0.07
PTPN7-209ENST00000477554 RAB3AP20336 220 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 NCS1P62166 190 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 GNG3P63215 75 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 DGUOKQ16854 277 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 OR5A2Q8NGI9 324 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 ANGPTL6Q8NI99 470 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 TBX15Q96SF7 602 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 RNF167Q9H6Y7 350 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 TAS2R4Q9NYW5 299 aa14.58□□□□□ -0.07
PTPN7-209ENST00000477554 MEGF11A6BM72 1044 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 F8VVB4 439 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 F8VWA3 439 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 PDCD5O14737 125 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 SULT1B1O43704 296 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 OCMP0CE72 109 aaPredicted RBP14.58□□□□□ -0.08
PTPN7-209ENST00000477554 MUC1P15941 1255 aaPredicted RBP14.58□□□□□ -0.08
PTPN7-209ENST00000477554 PSMD7P51665 324 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 HILS1P60008 231 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 CNN3Q15417 329 aaKnown RBP14.58□□□□□ -0.08
PTPN7-209ENST00000477554 ZNF529Q6P280 563 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 OR10Z1Q8NGY1 313 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 SPATA3Q8NHX4 192 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 UPRTQ96BW1 309 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 ORAI1Q96D31 301 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 HIST1H2AAQ96QV6 131 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 PCGF1Q9BSM1 259 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 TMEM138Q9NPI0 162 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 KAAG1Q9UBP8 84 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 NUP50Q9UKX7 468 aa14.58□□□□□ -0.08
PTPN7-209ENST00000477554 TRAV8-7A0A075B6U6 113 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 MAGEB3O15480 346 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 IL1AP01583 271 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 PSG2P11465 335 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 GLRA1P23415 457 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 SDC2P34741 201 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 HAAOP46952 286 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 SERPINB10P48595 397 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 ARF6P62330 175 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 FOXB2Q5VYV0 432 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 BTNL3Q6UXE8 466 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 PDZD9Q8IXQ8 264 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 NKAIN3Q8N8D7 197 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 OR13C9Q8NGT0 318 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 NLKQ9UBE8 527 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 DNAJB11Q9UBS4 358 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 ZNF222Q9UK12 451 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 SLC7A11Q9UPY5 501 aa14.57□□□□□ -0.08
PTPN7-209ENST00000477554 IGKV1-9A0A0C4DH69 117 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 FAM230AA0A1W2PPH8 454 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 OR2AT4A6NND4 320 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 CDRT1O95170 752 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 PLATP00750 562 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 MAS1P04201 325 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 ALDOBP05062 364 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 ATF1P18846 271 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 RAB3BP20337 219 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 PRKACBP22694 351 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 BDKRB2P30411 391 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 TGFBR1P36897 503 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 KCNJ8Q15842 424 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 ASPHD2Q6ICH7 369 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 ZNF788Q6ZQV5 615 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 BPIFB2Q8N4F0 458 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 CD177Q8N6Q3 437 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 ZNRF1Q8ND25 227 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 SPSB1Q96BD6 273 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 SIRPDQ9H106 197 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 DCSTAMPQ9H295 470 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 RPUSD1Q9UJJ7 312 aaKnown RBP14.56□□□□□ -0.08
PTPN7-209ENST00000477554 MAB21L2Q9Y586 359 aa14.56□□□□□ -0.08
PTPN7-209ENST00000477554 OR5B21A6NL26 309 aa14.55□□□□□ -0.08
PTPN7-209ENST00000477554 NDUFA2O43678 99 aa14.55□□□□□ -0.08
PTPN7-209ENST00000477554 ENSAO43768 121 aaKnown RBP14.55□□□□□ -0.08
PTPN7-209ENST00000477554 CPT2P23786 658 aa14.55□□□□□ -0.08
PTPN7-209ENST00000477554 GABRA2P47869 451 aa14.55□□□□□ -0.08
PTPN7-209ENST00000477554 NPY4RP50391 375 aa14.55□□□□□ -0.08
PTPN7-209ENST00000477554 SPCS2Q15005 226 aa14.55□□□□□ -0.08
PTPN7-209ENST00000477554 ATPAF1Q5TC12 328 aaPredicted RBP14.55□□□□□ -0.08
PTPN7-209ENST00000477554 LRRTM1Q86UE6 522 aa14.55□□□□□ -0.08
PTPN7-209ENST00000477554 DNAAF1Q8NEP3 725 aa14.55□□□□□ -0.08
PTPN7-209ENST00000477554 NDNFQ8TB73 568 aa14.55□□□□□ -0.08
PTPN7-209ENST00000477554 CPNE2Q96FN4 548 aaPredicted RBP14.55□□□□□ -0.08
PTPN7-209ENST00000477554 IL36RNQ9UBH0 155 aa14.55□□□□□ -0.08
PTPN7-209ENST00000477554 SHISA3A0PJX4 238 aa14.54□□□□□ -0.08
PTPN7-209ENST00000477554 HCKP08631 526 aa14.54□□□□□ -0.08
PTPN7-209ENST00000477554 PGA5P0DJD9 388 aa14.54□□□□□ -0.08
PTPN7-209ENST00000477554 AZGP1P25311 298 aaKnown RBP14.54□□□□□ -0.08
PTPN7-209ENST00000477554 FUT6P51993 359 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms