RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ST3GAL6Q9Y274 331 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 ETV7Q9Y603 341 aa13.55□□□□□ -0.24
VHL-203ENST00000477538 ARHGAP32A7KAX9 2087 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 RFPL4AA6NLU0 287 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 RFPL4AL1F8VTS6 287 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 GYPAP02724 150 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 PSG2P11465 335 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 RAB6AP20340 208 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 DUSP1P28562 367 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 CEBPDP49716 269 aaPredicted RBP13.54□□□□□ -0.24
VHL-203ENST00000477538 RPS27AP62979 156 aaKnown RBP13.54□□□□□ -0.24
VHL-203ENST00000477538 DYNC1I2Q13409 638 aaKnown RBP13.54□□□□□ -0.24
VHL-203ENST00000477538 IL13RA2Q14627 380 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 ZNF146Q15072 292 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 KCNJ8Q15842 424 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 STUMQ69YW2 141 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 MZT2AQ6P582 158 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 LRRC28Q86X40 367 aaPredicted RBP13.54□□□□□ -0.24
VHL-203ENST00000477538 PTX4Q96A99 478 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 Q96M66 194 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 FOXC2Q99958 501 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 TMEM246Q9BRR3 403 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 SLIRPQ9GZT3 109 aaKnown RBP13.54□□□□□ -0.24
VHL-203ENST00000477538 GLS2Q9UI32 602 aa13.54□□□□□ -0.24
VHL-203ENST00000477538 ABCA2Q9BZC7 2435 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 IGKV1D-17A0A075B6S4 117 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 IGHV4-30-2A0A087WSY4 118 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 VWC2LB2RUY7 222 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 GEMIN2O14893 280 aaKnown RBP13.53□□□□□ -0.24
VHL-203ENST00000477538 HAND1O96004 215 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 TFF1P04155 84 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 GABRA2P47869 451 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 EFNB2P52799 333 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 IKZF1Q13422 519 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 TMEM155Q4W5P6 130 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 SHEQ5VZ18 495 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 PRSS57Q6UWY2 283 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 LINC00596Q86U02 117 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 ANGPTL6Q8NI99 470 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 GAL3ST1Q99999 423 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 NICN1Q9BSH3 213 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 URM1Q9BTM9 101 aaKnown RBP13.53□□□□□ -0.24
VHL-203ENST00000477538 TM2D1Q9BX74 207 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 LPAR5Q9H1C0 372 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 NARFLQ9H6Q4 476 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 COMMD3Q9UBI1 195 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 ZNF222Q9UK12 451 aa13.53□□□□□ -0.24
VHL-203ENST00000477538 MALRD1Q5VYJ5 2156 aa13.52□□□□□ -0.24
VHL-203ENST00000477538 MED13LQ71F56 2210 aa13.52□□□□□ -0.24
VHL-203ENST00000477538 NKX6-3A6NJ46 265 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 SH2D1BO14796 132 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 NDUFA2O43678 99 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 CPT2P23786 658 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 GABRR1P24046 479 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 PRDX2P32119 198 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 NR4A2P43354 598 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 ART1P52961 327 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 SCN1BQ07699 218 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 PDCD1Q15116 288 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 TAF9Q16594 264 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 MPV17LQ2QL34 196 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 CNPY1Q3B7I2 92 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 DCDC5Q6ZRR9 648 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 KRTAP1-3Q8IUG1 177 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 SPICQ8N5J4 248 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 SAMD12Q8N8I0 201 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 MCFD2Q8NI22 146 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 SLC25A38Q96DW6 304 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 CCL13Q99616 98 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 DNTTIP1Q9H147 329 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 RHBDL2Q9NX52 303 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 WNK2Q9Y3S1 2297 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 MYO9AB2RTY4 2548 aa13.52□□□□□ -0.25
VHL-203ENST00000477538 CSMD2Q7Z408 3487 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 NOTCH2Q04721 2471 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 A0A075B6Q4 140 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM90A10PA6NDY2 464 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM90A18PA6NE21 464 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM90A16PA6NEW6 464 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM90A20PA6NIJ5 464 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM90A8PA6NJQ4 464 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM90A7PA6NKC0 464 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 CEACAM18A8MTB9 384 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM90A22PA8MWA6 464 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM90A12PA8MX19 464 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM90A5PA8MXJ8 464 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM90A23PA8MXZ1 464 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 TNFRSF13BO14836 293 aaPredicted RBP13.51□□□□□ -0.25
VHL-203ENST00000477538 OR7C1O76099 320 aaPredicted RBP13.51□□□□□ -0.25
VHL-203ENST00000477538 OR2H2O95918 312 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM90A15PP0C7V4 464 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM90A13PP0C7W8 464 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM90A14PP0C7W9 464 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM90A24PP0C7X0 464 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 ZNF44P15621 663 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 SLC25A16P16260 332 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 AMY2BP19961 511 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 FAM189A2Q15884 450 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 UBE2NLQ5JXB2 153 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 ATPAF1Q5TC12 328 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms