RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 TBX15Q96SF7 602 aa12.99□□□□□ -0.33
TSSC4-208ENST00000467308 TCF7L1Q9HCS4 588 aa12.99□□□□□ -0.33
TSSC4-208ENST00000467308 IGHV1-69DA0A0B4J2H0 117 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 MEGF11A6BM72 1044 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 ANKRD61A6NGH8 418 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 IGHV1-69P01742 117 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 ZNF20P17024 532 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 ACKR3P25106 362 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 SDC2P34741 201 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 CD200P41217 278 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 PSMD7P51665 324 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 CNPY1Q3B7I2 92 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 GFOD2Q3B7J2 385 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 METTL11BQ5VVY1 283 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 LRRTM1Q86UE6 522 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 LDLRAD3Q86YD5 345 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 CROCCP3Q8IVE0 287 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 CDH26Q8IXH8 852 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 FTMTQ8N4E7 242 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 PNLDC1Q8NA58 520 aaKnown RBP12.98□□□□□ -0.33
TSSC4-208ENST00000467308 SLC25A46Q96AG3 418 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 TECTBQ96PL2 329 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 CHST5Q9GZS9 411 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 ZCCHC4Q9H5U6 513 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 PLEKHA1Q9HB21 404 aa12.98□□□□□ -0.33
TSSC4-208ENST00000467308 CCDC59Q9P031 241 aaKnown RBP12.98□□□□□ -0.33
TSSC4-208ENST00000467308 TRAV8-7A0A075B6U6 113 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 ZNF816-ZNF321PA0A0X1KG74 233 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 SHISA3A0PJX4 238 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 CD300LBA8K4G0 201 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 PDCD5O14737 125 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 CDRT1O95170 752 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 TSPAN15O95858 294 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 CST4P01036 141 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 TGFBR1P36897 503 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 RPS19P39019 145 aaKnown RBP12.97□□□□□ -0.33
TSSC4-208ENST00000467308 IER3P46695 156 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 SERPINB10P48595 397 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 C11orf91Q3C1V1 193 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 FBLN7Q53RD9 439 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 ZSCAN4Q8NAM6 433 aaPredicted RBP12.97□□□□□ -0.33
TSSC4-208ENST00000467308 PTTG2Q9NZH5 202 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 CTSZQ9UBR2 303 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 PIGLQ9Y2B2 252 aa12.97□□□□□ -0.33
TSSC4-208ENST00000467308 A0A1W2PPK0 400 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 NDUFA2O43678 99 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 SULT1B1O43704 296 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 IGHV4-59P01825 116 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 ALDOBP05062 364 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 PPP3R1P63098 170 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 C2orf68Q2NKX9 166 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 CEP78Q5JTW2 689 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 CLVS2Q5SYC1 327 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 C1QL4Q86Z23 238 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 NKAIN3Q8N8D7 197 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 C19orf18Q8NEA5 215 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 OR56B2PQ8NGI1 322 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 SLC22A4Q9H015 551 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 SIRPDQ9H106 197 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 DPAGT1Q9H3H5 408 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 C16orf95Q9H693 158 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 ABCB9Q9NP78 766 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 TMEM138Q9NPI0 162 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 TAS2R4Q9NYW5 299 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 MRPL15Q9P015 296 aaKnown RBP12.96□□□□□ -0.33
TSSC4-208ENST00000467308 RNF7Q9UBF6 113 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 NOP16Q9Y3C1 178 aaKnown RBP12.96□□□□□ -0.33
TSSC4-208ENST00000467308 A3GALT2U3KPV4 340 aa12.96□□□□□ -0.33
TSSC4-208ENST00000467308 GGT3PA6NGU5 568 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 H3BSH0 61 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 LGALS8O00214 317 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 PTBP3O95758 552 aaKnown RBP12.95□□□□□ -0.34
TSSC4-208ENST00000467308 FAHP16930 419 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 ZNF182P17025 639 aaPredicted RBP12.95□□□□□ -0.34
TSSC4-208ENST00000467308 RAB3AP20336 220 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 RAB3BP20337 219 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 GNALP38405 381 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 RORCP51449 518 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 DYNC1I2Q13409 638 aaKnown RBP12.95□□□□□ -0.34
TSSC4-208ENST00000467308 MPPED2Q15777 294 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 LYPD6Q86Y78 171 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 OR1M1Q8NGA1 313 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 SPSB1Q96BD6 273 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 FN3KRPQ9HA64 309 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 NEK6Q9HC98 313 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 UFSP2Q9NUQ7 469 aa12.95□□□□□ -0.34
TSSC4-208ENST00000467308 TRAV38-1A0A0B4J264 116 aa12.94□□□□□ -0.34
TSSC4-208ENST00000467308 A0A0U1RQK1 487 aa12.94□□□□□ -0.34
TSSC4-208ENST00000467308 NOTOA8MTQ0 251 aa12.94□□□□□ -0.34
TSSC4-208ENST00000467308 ADAM20O43506 726 aa12.94□□□□□ -0.34
TSSC4-208ENST00000467308 GMDSO60547 372 aa12.94□□□□□ -0.34
TSSC4-208ENST00000467308 ATF1P18846 271 aa12.94□□□□□ -0.34
TSSC4-208ENST00000467308 SOX6P35712 828 aa12.94□□□□□ -0.34
TSSC4-208ENST00000467308 RANBP1P43487 201 aa12.94□□□□□ -0.34
TSSC4-208ENST00000467308 DGUOKQ16854 277 aa12.94□□□□□ -0.34
TSSC4-208ENST00000467308 PRAMEF6Q5VXH4 476 aa12.94□□□□□ -0.34
TSSC4-208ENST00000467308 SFRP4Q6FHJ7 346 aaPredicted RBP12.94□□□□□ -0.34
TSSC4-208ENST00000467308 Q6ZSV7 163 aa12.94□□□□□ -0.34
TSSC4-208ENST00000467308 NR2C2APQ86WQ0 139 aa12.94□□□□□ -0.34
TSSC4-208ENST00000467308 SCCPDHQ8NBX0 429 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms