RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 SNU13P55769 128 aaKnown RBP5.32□□□□□ -1.56
SF3B1-206ENST00000462613 CAV3P56539 151 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 ZP1P60852 638 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 FGF12P61328 243 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 ERVK11-1P61568 191 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 IL13RA2Q14627 380 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 ZNF146Q15072 292 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 RAB11BQ15907 218 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 SSX1Q16384 188 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 DGUOKQ16854 277 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 MPV17LQ2QL34 196 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 SLC22A6Q4U2R8 563 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 FAM27D1Q5T7N8 215 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 METTL11BQ5VVY1 283 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 ELP2Q6IA86 826 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 C22orf42Q6IC83 251 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 FAHD2BQ6P2I3 314 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-206ENST00000462613 CD200R1LQ6Q8B3 271 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 GLIPR1L1Q6UWM5 242 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 TMEM91Q6ZNR0 172 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 ZNF788Q6ZQV5 615 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 GPR141Q7Z602 305 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 TPRA1Q86W33 373 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 CROCCP3Q8IVE0 287 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 BATF2Q8N1L9 274 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 OSR2Q8N2R0 312 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 FAM216BQ8N7L0 139 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 KCNG3Q8TAE7 436 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 NEK7Q8TDX7 302 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 RAB40AQ8WXH6 277 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 ORAI1Q96D31 301 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 SDSLQ96GA7 329 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 FAHD2AQ96GK7 314 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 C1orf159Q96HA4 380 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 DMRTB1Q96MA1 342 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 ZNF488Q96MN9 340 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 NUDT16L1Q9BRJ7 211 aaKnown RBP5.32□□□□□ -1.56
SF3B1-206ENST00000462613 CHCHD6Q9BRQ6 235 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 URM1Q9BTM9 101 aaKnown RBP5.32□□□□□ -1.56
SF3B1-206ENST00000462613 CNTD2Q9H8S5 307 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 SEBOXQ9HB31 216 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-206ENST00000462613 SPACA1Q9HBV2 294 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 HMG20AQ9NP66 347 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 RBFOX1Q9NWB1 397 aaKnown RBP5.32□□□□□ -1.56
SF3B1-206ENST00000462613 TXNL4BQ9NX01 149 aaKnown RBP5.32□□□□□ -1.56
SF3B1-206ENST00000462613 IL36GQ9NZH8 169 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 CDC42EP3Q9UKI2 254 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 SF3B6Q9Y3B4 125 aaKnown RBP5.32□□□□□ -1.56
SF3B1-206ENST00000462613 V9GY05 133 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 CSPG4Q6UVK1 2322 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 NBPF19A0A087WUL8 3843 aa5.32□□□□□ -1.56
SF3B1-206ENST00000462613 TLN2Q9Y4G6 2542 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 IGKV1D-17A0A075B6S4 117 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 IGHV2-70DA0A0C4DH43 119 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 SLC17A2O00624 439 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 MGST3O14880 152 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 DEGS1O15121 323 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 PIN1P1O15428 100 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 PHF1O43189 567 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-206ENST00000462613 TMEM127O75204 238 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 CRTAPO75718 401 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-206ENST00000462613 OR7C1O76099 320 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-206ENST00000462613 CDRT1O95170 752 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 ARSBP15848 533 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 SRP14P37108 136 aaKnown RBP5.31□□□□□ -1.56
SF3B1-206ENST00000462613 NPBWR2P48146 333 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 KCNJ3P48549 501 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 GP2P55259 537 aaKnown RBP5.31□□□□□ -1.56
SF3B1-206ENST00000462613 EDDM3BP56851 147 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 COL10A1Q03692 680 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 SCN1BQ07699 218 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 RBM39Q14498 530 aaKnown RBP5.31□□□□□ -1.56
SF3B1-206ENST00000462613 INSL4Q14641 139 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 GRK1Q15835 563 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 CHRFAM7AQ494W8 412 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 ATAD3CQ5T2N8 411 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 LYPD2Q6UXB3 125 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 BTN2A1Q7KYR7 527 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 OR8H2Q8N162 312 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 ZNRF1Q8ND25 227 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 OR10K1Q8NGX5 313 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 PHF21AQ96BD5 680 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 SEH1LQ96EE3 360 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 POM121Q96HA1 1249 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 SNX22Q96L94 193 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 GAFA1Q96PS6 74 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 TMEM59Q9BXS4 323 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 BEX2Q9BXY8 128 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 BARHL1Q9BZE3 327 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 C7orf69Q9H7B7 122 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 RAB9BQ9NP90 201 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 TMEM160Q9NX00 188 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 CTSZQ9UBR2 303 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 ST3GAL6Q9Y274 331 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 POLR3KQ9Y2Y1 108 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-206ENST00000462613 AK6Q9Y3D8 172 aaKnown RBP5.31□□□□□ -1.56
SF3B1-206ENST00000462613 AUP1Q9Y679 476 aa5.31□□□□□ -1.56
SF3B1-206ENST00000462613 CELSR1Q9NYQ6 3014 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 IGKV1-12A0A0C4DH73 117 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 hADV38S2A0JD32 116 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms