RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 IGHV3-9P01782 118 aa10.79□□□□□ -0.68
LINC00959-201ENST00000456581 GDF1P27539 372 aa10.79□□□□□ -0.68
LINC00959-201ENST00000456581 RPL12P30050 165 aaKnown RBP10.79□□□□□ -0.68
LINC00959-201ENST00000456581 PLA2G5P39877 138 aa10.79□□□□□ -0.68
LINC00959-201ENST00000456581 CYCSP99999 105 aaKnown RBP10.79□□□□□ -0.68
LINC00959-201ENST00000456581 IL15RAQ13261 267 aa10.79□□□□□ -0.68
LINC00959-201ENST00000456581 TAF9Q16594 264 aa10.79□□□□□ -0.68
LINC00959-201ENST00000456581 PNLIPRP3Q17RR3 467 aa10.79□□□□□ -0.68
LINC00959-201ENST00000456581 SNAI3Q3KNW1 292 aa10.79□□□□□ -0.68
LINC00959-201ENST00000456581 GGNQ86UU5 652 aa10.79□□□□□ -0.68
LINC00959-201ENST00000456581 HIST1H2BAQ96A08 127 aa10.79□□□□□ -0.68
LINC00959-201ENST00000456581 SMIM8Q96KF7 97 aa10.79□□□□□ -0.68
LINC00959-201ENST00000456581 PIGQQ9BRB3 760 aa10.79□□□□□ -0.68
LINC00959-201ENST00000456581 GPR173Q9NS66 373 aa10.79□□□□□ -0.68
LINC00959-201ENST00000456581 PIGLQ9Y2B2 252 aa10.79□□□□□ -0.68
LINC00959-201ENST00000456581 PRR14LQ5THK1 2151 aa10.79□□□□□ -0.68
LINC00959-201ENST00000456581 TXNL1O43396 289 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 SPINK2P20155 84 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 FKBP2P26885 142 aaKnown RBP10.78□□□□□ -0.68
LINC00959-201ENST00000456581 NAAAQ02083 359 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 SRYQ05066 204 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 ZNF616Q08AN1 781 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 RSPO1Q2MKA7 263 aaPredicted RBP10.78□□□□□ -0.68
LINC00959-201ENST00000456581 PHLDA2Q53GA4 152 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 LURAP1LQ8IV03 231 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 TMEM123Q8N131 208 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 MARS2Q96GW9 593 aaKnown RBP10.78□□□□□ -0.68
LINC00959-201ENST00000456581 ALKBH3Q96Q83 286 aaPredicted RBP10.78□□□□□ -0.68
LINC00959-201ENST00000456581 BCL2L14Q9BZR8 327 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 WFDC1Q9HC57 220 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 ANAPC10Q9UM13 185 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 K7EPK0 472 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 IGHEP01854 428 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 ZNF806P0C7X5 589 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 TMEM225BP0DP42 221 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 TBPP20226 339 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 ITGA3P26006 1051 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 FOXO1Q12778 655 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 ZNF239Q16600 458 aaKnown RBP10.78□□□□□ -0.68
LINC00959-201ENST00000456581 KRBOX4Q5JUW0 171 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 FAM71E2Q8N5Q1 922 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 DMBX1Q8NFW5 382 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 URM1Q9BTM9 101 aaKnown RBP10.78□□□□□ -0.68
LINC00959-201ENST00000456581 ABHD14AQ9BUJ0 271 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 DDA1Q9BW61 102 aa10.78□□□□□ -0.68
LINC00959-201ENST00000456581 PRSS44E7EML9 344 aa10.77□□□□□ -0.68
LINC00959-201ENST00000456581 NEURL1O76050 574 aa10.77□□□□□ -0.68
LINC00959-201ENST00000456581 SRD5A2P31213 254 aa10.77□□□□□ -0.68
LINC00959-201ENST00000456581 CARD18P57730 90 aa10.77□□□□□ -0.68
LINC00959-201ENST00000456581 ENDOGQ14249 297 aaKnown RBP10.77□□□□□ -0.68
LINC00959-201ENST00000456581 FAM209BQ5JX69 171 aa10.77□□□□□ -0.68
LINC00959-201ENST00000456581 GGNBP1Q5YKI7 109 aa10.77□□□□□ -0.68
LINC00959-201ENST00000456581 BTNL8Q6UX41 500 aa10.77□□□□□ -0.68
LINC00959-201ENST00000456581 SSC4DQ8WTU2 575 aa10.77□□□□□ -0.68
LINC00959-201ENST00000456581 ABHD3Q8WU67 409 aa10.77□□□□□ -0.68
LINC00959-201ENST00000456581 EDARADDQ8WWZ3 215 aa10.77□□□□□ -0.68
LINC00959-201ENST00000456581 KIRREL1Q96J84 757 aa10.77□□□□□ -0.68
LINC00959-201ENST00000456581 NIT2Q9NQR4 276 aa10.77□□□□□ -0.68
LINC00959-201ENST00000456581 KIAA2026Q5HYC2 2103 aa10.77□□□□□ -0.68
LINC00959-201ENST00000456581 LOC102725191A0A1B0GVB3 256 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 A0A1W2PPE2 198 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 FAM230AA0A1W2PPH8 454 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 FAM166BA8MTA8 275 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 C3orf80F5H4A9 247 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 EIF1BO60739 113 aaKnown RBP10.77□□□□□ -0.69
LINC00959-201ENST00000456581 IFNA2P01563 188 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 CD5P06127 495 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 NQO2P16083 231 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 ACKR3P25106 362 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 MIDNQ504T8 468 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 FAM76BQ5HYJ3 339 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 IL34Q6ZMJ4 242 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 OR11L1Q8NGX0 322 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 OR10D3Q8NH80 312 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 NABP1Q96AH0 204 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 CNTNAP3Q9BZ76 1288 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 TMEM9BQ9NQ34 198 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 GSN-AS1Q9NRJ2 163 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 PLEKHJ1Q9NW61 149 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 GHRLQ9UBU3 117 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 FBLN5Q9UBX5 448 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 CACFD1Q9UGQ2 172 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 DMXL2Q8TDJ6 3036 aa10.77□□□□□ -0.69
LINC00959-201ENST00000456581 CCDC187A0A096LP49 1063 aa10.76□□□□□ -0.69
LINC00959-201ENST00000456581 FOXI3A8MTJ6 420 aaPredicted RBP10.76□□□□□ -0.69
LINC00959-201ENST00000456581 LYL1P12980 280 aa10.76□□□□□ -0.69
LINC00959-201ENST00000456581 RBMXP38159 391 aaKnown RBP10.76□□□□□ -0.69
LINC00959-201ENST00000456581 SRSF6Q13247 344 aaKnown RBP10.76□□□□□ -0.69
LINC00959-201ENST00000456581 DCAF10Q5QP82 559 aa10.76□□□□□ -0.69
LINC00959-201ENST00000456581 NCMAPQ5T1S8 102 aa10.76□□□□□ -0.69
LINC00959-201ENST00000456581 TMEM164Q5U3C3 297 aa10.76□□□□□ -0.69
LINC00959-201ENST00000456581 TMEM268Q5VZI3 342 aa10.76□□□□□ -0.69
LINC00959-201ENST00000456581 LYZL2Q7Z4W2 148 aa10.76□□□□□ -0.69
LINC00959-201ENST00000456581 FAM24BQ8N5W8 94 aa10.76□□□□□ -0.69
LINC00959-201ENST00000456581 OR5L1Q8NGL2 311 aa10.76□□□□□ -0.69
LINC00959-201ENST00000456581 LOXL4Q96JB6 756 aa10.76□□□□□ -0.69
LINC00959-201ENST00000456581 ZPBPQ9BS86 351 aa10.76□□□□□ -0.69
LINC00959-201ENST00000456581 ULBP2Q9BZM5 246 aa10.76□□□□□ -0.69
LINC00959-201ENST00000456581 CRLF2Q9HC73 371 aa10.76□□□□□ -0.69
LINC00959-201ENST00000456581 CEACAM18A8MTB9 384 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms