RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 LY6EQ16553 131 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 TREML4Q6UXN2 200 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 TRAPPC6BQ86SZ2 158 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 SYS1Q8N2H4 156 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 OR51A4Q8NGJ6 313 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 OR13D1Q8NGV5 346 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 LINC01006Q8NI28 216 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 PPP1R35Q8TAP8 253 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 C17orf50Q8WW18 174 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 SNX22Q96L94 193 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 SLC29A1Q99808 456 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 CHST6Q9GZX3 395 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 MYRFQ9Y2G1 1151 aa16.18■□□□□ 0.18
SHROOM1-204ENST00000440118 IGKV1-9A0A0C4DH69 117 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 hADV38S2A0JD32 116 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 ZNF737O75373 536 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 ARG1P05089 322 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 RPSAP08865 295 aaKnown RBP16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 CCDC159P0C7I6 412 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 ZNF728P0DKX0 622 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 CALCBP10092 127 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 GABRB1P18505 474 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 DUSP1P28562 367 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 GBX2P52951 348 aaPredicted RBP16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 MRPL28Q13084 256 aaKnown RBP16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 SPIN3Q5JUX0 258 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 Q6ZSV7 163 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 OR5D18Q8NGL1 313 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 OR10AC1Q8NH08 325 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 RNF166Q96A37 237 aaPredicted RBP16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 ZNF714Q96N38 554 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 RAB18Q9NP72 206 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 FAM118AQ9NWS6 357 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 SMPD3Q9NY59 655 aaPredicted RBP16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 IL36RNQ9UBH0 155 aa16.17■□□□□ 0.18
SHROOM1-204ENST00000440118 TMEM212A6NML5 194 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 OR4C45A6NMZ5 311 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 E9PQ18 207 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 M0QZ24 198 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 SIRPB1O00241 398 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 TIMM23O14925 209 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 IGHA1P01876 353 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 NPBWR2P48146 333 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 DYNC1I2Q13409 638 aaKnown RBP16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 KLHL22Q53GT1 634 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 PLA1AQ53H76 456 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 OR5AK2Q8NH90 309 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 RHOXF1Q8NHV9 184 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 SPACA5Q96QH8 159 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 ZCCHC4Q9H5U6 513 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 ISG20L2Q9H9L3 353 aaKnown RBP16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 EXOSC4Q9NPD3 245 aaKnown RBP16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 ERVK13-1Q9NX77 482 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 DHDHQ9UQ10 334 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 GSTK1Q9Y2Q3 226 aa16.16■□□□□ 0.18
SHROOM1-204ENST00000440118 TMEM82A0PJX8 343 aa16.15■□□□□ 0.18
SHROOM1-204ENST00000440118 GABRA5P31644 462 aa16.15■□□□□ 0.18
SHROOM1-204ENST00000440118 PDZK1IP1Q13113 114 aa16.15■□□□□ 0.18
SHROOM1-204ENST00000440118 OR52I1Q8NGK6 324 aa16.15■□□□□ 0.18
SHROOM1-204ENST00000440118 OR4C13Q8NGP0 309 aa16.15■□□□□ 0.18
SHROOM1-204ENST00000440118 FOXRED1Q96CU9 486 aaPredicted RBP16.15■□□□□ 0.18
SHROOM1-204ENST00000440118 TCF7L1Q9HCS4 588 aa16.15■□□□□ 0.18
SHROOM1-204ENST00000440118 ABCB10Q9NRK6 738 aa16.15■□□□□ 0.18
SHROOM1-204ENST00000440118 C17orf98A8MV24 154 aa16.14■□□□□ 0.17
SHROOM1-204ENST00000440118 SH2D1BO14796 132 aa16.14■□□□□ 0.17
SHROOM1-204ENST00000440118 RBP4P02753 201 aa16.14■□□□□ 0.17
SHROOM1-204ENST00000440118 PAX6P26367 422 aa16.14■□□□□ 0.17
SHROOM1-204ENST00000440118 MEF2CQ06413 473 aaPredicted RBP16.14■□□□□ 0.17
SHROOM1-204ENST00000440118 TPRX1Q8N7U7 411 aa16.14■□□□□ 0.17
SHROOM1-204ENST00000440118 OR5D14Q8NGL3 314 aa16.14■□□□□ 0.17
SHROOM1-204ENST00000440118 HAVCR2Q8TDQ0 301 aa16.14■□□□□ 0.17
SHROOM1-204ENST00000440118 CPNE2Q96FN4 548 aaPredicted RBP16.14■□□□□ 0.17
SHROOM1-204ENST00000440118 RDH12Q96NR8 316 aa16.14■□□□□ 0.17
SHROOM1-204ENST00000440118 CITED1Q99966 193 aa16.14■□□□□ 0.17
SHROOM1-204ENST00000440118 TRRAPQ9Y4A5 3859 aa16.14■□□□□ 0.17
SHROOM1-204ENST00000440118 MGST3O14880 152 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 MAGEB3O15480 346 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 ZFPL1O95159 310 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 IGHV1-8P0DP01 117 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 TMEM225BP0DP42 221 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 ZNF44P15621 663 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 SCN1BQ07699 218 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 FAM189A2Q15884 450 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 AANATQ16613 207 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 LPCAT4Q643R3 524 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 SERPINA12Q8IW75 414 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 C11orf42Q8N5U0 333 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 CYGBQ8WWM9 190 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 PDCD1LG2Q9BQ51 273 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 C16orf95Q9H693 158 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 HMG20AQ9NP66 347 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 TBL2Q9Y4P3 447 aaKnown RBP16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 LINC00312Q9Y6C7 94 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 KIAA2026Q5HYC2 2103 aa16.13■□□□□ 0.17
SHROOM1-204ENST00000440118 WNK1Q9H4A3 2382 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 IRGMA1A4Y4 181 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 FUOMA2VDF0 154 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 SULT1B1O43704 296 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 TSPAN9O75954 239 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 CLPXO76031 633 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms