RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 OPA3Q9H6K4 179 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 TECTAO75443 2155 aa10.14□□□□□ -0.79
TRAPPC9-202ENST00000438773 IGKV1D-43A0A0B4J1Z2 117 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZNF705FA8MVS1 300 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 SNRPGP15A8MWD9 76 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 SIRPB1O00241 398 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZIC3O60481 467 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 CDC14BO60729 498 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 IFNA2P01563 188 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 CLPSP04118 112 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 NMBP08949 121 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZNF705DP0CH99 300 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZNF705BP0CI00 300 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 PRDX4Q13162 271 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 PNLIPRP3Q17RR3 467 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 HIST2H3PS2Q5TEC6 136 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 AADACL3Q5VUY0 350 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 BRICD5Q6PL45 260 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 KIRREL1Q96J84 757 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 TECTBQ96PL2 329 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 ENY2Q9NPA8 101 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 PCDHB10Q9UN67 800 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 PCNX1Q96RV3 2341 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 ANKRD20A5PA0PJZ0 165 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 IFNA17P01571 189 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 NQO2P16083 231 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 FUT3P21217 361 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 MPGP29372 298 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 GSK3AP49840 483 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 UBE2KP61086 200 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 SNRPEP62304 92 aaKnown RBP10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 SOHLH1Q5JUK2 328 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 WFDC8Q8IUA0 241 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 OR11L1Q8NGX0 322 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 CHST6Q9GZX3 395 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZNF230Q9UIE0 474 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 A0A0G2JMM0 328 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 A0A1W2PPB8 328 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 A0A1W2PRS3 328 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 MFSD2BA6NFX1 497 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 KIR3DP1A8MWS1 328 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 LMX1BO60663 402 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZNF205O95201 554 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 IFNA5P01569 189 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 FCGR2CP31995 323 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 ECI1P42126 302 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 NAA40Q86UY6 237 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 FN3KRPQ9HA64 309 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 CD300LBA8K4G0 201 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 CTDSPLO15194 276 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 SOCS1O15524 211 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 VSIG8P0DPA2 414 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 RPS11P62280 158 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 HIKESHIQ53FT3 197 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 UNQ9370/PRO34162Q6UXP9 181 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 CDH26Q8IXH8 852 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 OR1S2Q8NGQ3 325 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 SLC25A38Q96DW6 304 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 GFI1Q99684 422 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 FAAP24Q9BTP7 215 aa10.13□□□□□ -0.79
TRAPPC9-202ENST00000438773 KIAA1549LQ6ZVL6 1849 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 PRSS44E7EML9 344 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 IGHMP01871 453 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZP3P21754 424 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 EIF2S3P41091 472 aaKnown RBP10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 ARRDC1Q8N5I2 433 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 RSRP1Q9BUV0 290 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 NPTNQ9Y639 398 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 GSTZ1O43708 216 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 ADRA2CP18825 462 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 RPS23P62266 143 aaKnown RBP10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 PSG4Q00888 419 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 KIAA0141Q14154 515 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 HAGHQ16775 308 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 FBXW9Q5XUX1 488 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 CLRN3Q8NCR9 226 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 HPSE2Q8WWQ2 592 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 HAS2Q92819 552 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 ISOC2Q96AB3 205 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 SH2D1BO14796 132 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 GLRA1P23415 457 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZNF83P51522 516 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 MECP2P51608 486 aaKnown RBP10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 RAG2P55895 527 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 RAB4BP61018 213 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 SSX2Q16385 188 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 DEFB108BQ8NET1 73 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 OR6K3Q8NGY3 331 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 OR10J5Q8NHC4 309 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 SEH1LQ96EE3 360 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 RAB9BQ9NP90 201 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 TMEM100Q9NV29 134 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 MMP24Q9Y5R2 645 aa10.12□□□□□ -0.79
TRAPPC9-202ENST00000438773 ZNHIT1O43257 154 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 SP6Q3SY56 376 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 RGS7BPQ6MZT1 257 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 GLDNQ6ZMI3 551 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 CXorf67Q86X51 503 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 SKA3Q8IX90 412 aa10.11□□□□□ -0.79
TRAPPC9-202ENST00000438773 FADS6Q8N9I5 356 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms