RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 FAM86B1Q8N7N1 296 aa1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 ECHDC3Q96DC8 303 aa1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 TPD52L3Q96J77 140 aa1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 PKNOX2Q96KN3 472 aa1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 JSRP1Q96MG2 331 aaPredicted RBP1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 OR5B12Q96R08 314 aa1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 SLC29A1Q99808 456 aa1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 C11orf70Q9BRQ4 267 aa1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 MRPL37Q9BZE1 423 aaKnown RBP1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 XKR8Q9H6D3 395 aa1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 TRIM45Q9H8W5 580 aaPredicted RBP1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 MYOZ1Q9NP98 299 aaPredicted RBP1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 CYTL1Q9NRR1 136 aa1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 AGPAT3Q9NRZ7 376 aa1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 CBLN4Q9NTU7 201 aa1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 OR12D3Q9UGF7 316 aa1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 ZNF222Q9UK12 451 aa1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 RRP15Q9Y3B9 282 aaKnown RBP1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 IKBKGQ9Y6K9 419 aa1.97□□□□□ -2.09
HMGB3P12-201ENST00000438745 TET2Q6N021 2002 aaPredicted RBP1.96□□□□□ -2.09
HMGB3P12-201ENST00000438745 MALRD1Q5VYJ5 2156 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 IGLV3-12A0A075B6K2 115 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 A0A0G2JMM0 328 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 A0A1W2PPB8 328 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 A0A1W2PRS3 328 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 GOLGA8OA6NCC3 632 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 KIR3DP1A8MWS1 328 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 GOLGA8NF8WBI6 632 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 H7C417 338 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 AIM2O14862 343 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 RNF13O43567 381 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 POP7O75817 140 aaKnown RBP1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 TRAPPC6AO75865 159 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 GLSO94925 669 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 RCBTB2O95199 551 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 TSPAN13O95857 204 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 LY6G6CO95867 125 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 IFNW1P05000 195 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 MSMBP08118 114 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 PRB4P10163 310 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 PGAM1P18669 254 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 GTF2H1P32780 548 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 DNASE1L1P49184 302 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 TMED10P49755 219 aaKnown RBP1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 FABP6P51161 128 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR4D2P58180 307 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 AP1S1P61966 158 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 RAP1AP62834 184 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 MAB21L1Q13394 359 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 DOC2AQ14183 400 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 GINS1Q14691 196 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 RGNQ15493 299 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 LINC00483Q53H64 154 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 NCMAPQ5T1S8 102 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 CCNJQ5T5M9 372 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 PRAMEF20Q5VT98 475 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 C16orf87Q6PH81 154 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 Q6ZSR3 168 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 PEX26Q7Z412 305 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 NELFCDQ8IXH7 590 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 SAXO1Q8IYX7 474 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 PGAM4Q8N0Y7 254 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 MUC15Q8N387 334 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 KIF2BQ8N4N8 673 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 ZFP41Q8N8Y5 198 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR4S1Q8NGB4 309 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR10R2Q8NGX6 335 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR51F2Q8NH61 342 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR5W2Q8NH69 310 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 EXOSC8Q96B26 276 aaKnown RBP1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 FOPNLQ96NB1 174 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 SERPINB12Q96P63 405 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 CYTH2Q99418 400 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 CCDC77Q9BR77 488 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 CHRNA10Q9GZZ6 450 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 ANKRA2Q9H9E1 313 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 SLC17A7Q9P2U7 560 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 BOKQ9UMX3 212 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 PSG8Q9UQ74 426 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 ST3GAL6Q9Y274 331 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 GOLT1BQ9Y3E0 138 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 CPAMD8Q8IZJ3 1885 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 HERC1Q15751 4861 aa1.96□□□□□ -2.1
HMGB3P12-201ENST00000438745 IGKV2-28A0A075B6P5 120 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 IGHV3-66A0A0C4DH42 116 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 A0A0G2JMP0 313 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 C1orf232A0A0U1RR37 186 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 A0A0X1KG70 313 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 SPRR5A0A1B0GTR4 108 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 SMCO3A2RU48 225 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR2AG2A6NM03 316 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 ZNF716A6NP11 495 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 H0YHG0 523 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 AIREO43918 545 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 OR2J3O76001 311 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 CTDNEP1O95476 244 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 IGKV2D-28P01615 120 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 ZNF735P0CB33 412 aa1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 TROVE2P10155 538 aaKnown RBP eCLIP1.95□□□□□ -2.1
HMGB3P12-201ENST00000438745 ZNF43P17038 809 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms