RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 ZNF281Q9Y2X9 895 aa10.23□□□□□ -0.77
MRPL55-209ENST00000366735 A0A0U1RQK1 487 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 NKX6-3A6NJ46 265 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 PSMD9O00233 223 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 SRSF10O75494 262 aaKnown RBP10.22□□□□□ -0.77
MRPL55-209ENST00000366735 ZFPL1O95159 310 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 PAHP00439 452 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 HSD11B1P28845 292 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 MTNR1BP49286 362 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 PROK1P58294 105 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 RPS11P62280 158 aaKnown RBP eCLIP10.22□□□□□ -0.77
MRPL55-209ENST00000366735 YIF1BQ5BJH7 314 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 LRRC10Q5BKY1 277 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 ASPHD2Q6ICH7 369 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 UNQ9370/PRO34162Q6UXP9 181 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 NAA40Q86UY6 237 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 GCSAMQ8N6F7 178 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 ZSCAN4Q8NAM6 433 aaPredicted RBP10.22□□□□□ -0.77
MRPL55-209ENST00000366735 OR5R1Q8NH85 324 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 SLAMF6Q96DU3 332 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 ABCB9Q9NP78 766 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 FRRS1LQ9P0K9 344 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 ZNRD1Q9P1U0 126 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 LRP12Q9Y561 859 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 R4GMQ9 66 aa10.22□□□□□ -0.77
MRPL55-209ENST00000366735 A0A075B6Q4 140 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 C5orf63A6NC05 138 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 ANKRD61A6NGH8 418 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 TMEM212A6NML5 194 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 ANXA2P2A6NMY6 339 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 TBX1O43435 398 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 NDUFB3O43676 98 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 RPP14O95059 124 aaKnown RBP10.21□□□□□ -0.77
MRPL55-209ENST00000366735 H2BFMP0C1H6 154 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 SOX6P35712 828 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 RPS19P39019 145 aaKnown RBP10.21□□□□□ -0.77
MRPL55-209ENST00000366735 KIR3DL2P43630 455 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 ACSM3Q53FZ2 586 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 NCR3LG1Q68D85 454 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 CEACAM19Q7Z692 300 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 CATSPERDQ86XM0 798 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 PRSS35Q8N3Z0 413 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 OR5AK2Q8NH90 309 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 LRRC29Q8WV35 223 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 THRSPQ92748 146 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 DNTTIP1Q9H147 329 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 C16orf95Q9H693 158 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 N6AMT1Q9Y5N5 214 aa10.21□□□□□ -0.77
MRPL55-209ENST00000366735 VWFP04275 2813 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 IGHV3OR15-7A0A075B7D8 119 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 TRAV1-2A0A0B4J238 106 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 TRBV5-5A0A0J9YX44 114 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 ACOD1A6NK06 481 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 ARL6IP5O75915 188 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 CDRT1O95170 752 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 LHBP01229 141 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 ANXA2P07355 339 aaKnown RBP10.2□□□□□ -0.78
MRPL55-209ENST00000366735 CSF1P09603 554 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 UCHL1P09936 223 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 RORCP51449 518 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 PRKXP51817 358 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 ZNF829Q3KNS6 432 aaPredicted RBP10.2□□□□□ -0.78
MRPL55-209ENST00000366735 WDR38Q5JTN6 314 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 C11orf88Q6PI97 169 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 Q6ZSV7 163 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 ZNF826PQ6ZT77 177 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 TPRA1Q86W33 373 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.2□□□□□ -0.78
MRPL55-209ENST00000366735 PDZD9Q8IXQ8 264 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 DTX3Q8N9I9 347 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 CSNK2A3Q8NEV1 391 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 RGP1Q92546 391 aaPredicted RBP10.2□□□□□ -0.78
MRPL55-209ENST00000366735 SPSB4Q96A44 273 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 SLC25A46Q96AG3 418 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 MICU1Q9BPX6 476 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 PDCD1LG2Q9BQ51 273 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 COMMD4Q9H0A8 199 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 CENPMQ9NSP4 180 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 DNAJB11Q9UBS4 358 aa10.2□□□□□ -0.78
MRPL55-209ENST00000366735 PLXNB1O43157 2135 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 LOC110117498-PIK3R3F6TDL0 507 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 NPFFO15130 113 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 TSPAN9O75954 239 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 TSPAN15O95858 294 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 ISG15P05161 165 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 SLC2A1P11166 492 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 SDC2P34741 201 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 CX3CR1P49238 355 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 PRR20EP86478 221 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 PRR20CP86479 221 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 PRR20DP86480 221 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 PRR20BP86481 221 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 PRR20AP86496 221 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 HOXA4Q00056 320 aaPredicted RBP10.19□□□□□ -0.78
MRPL55-209ENST00000366735 INSL4Q14641 139 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 C4orf46Q504U0 113 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 Q6ZTK2 550 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 ZNF676Q8N7Q3 588 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 LY6G5BQ8NDX9 201 aa10.19□□□□□ -0.78
MRPL55-209ENST00000366735 OR1M1Q8NGA1 313 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms