RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 RBFOX3A6NFN3 312 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 DXOO77932 396 aaKnown RBP12.24□□□□□ -0.45
COL6A1-201ENST00000361866 SMIM6P0DI80 62 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 HFEQ30201 348 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 PIGYQ3MUY2 71 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 LY6G6FQ5SQ64 297 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 SPATA46Q5T0L3 261 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 ZNF66Q6ZN08 573 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 LHFPL2Q6ZUX7 228 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 TMEM100Q9NV29 134 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 GPR179Q6PRD1 2367 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 HOXC4P09017 264 aaPredicted RBP12.24□□□□□ -0.45
COL6A1-201ENST00000361866 UBE2G2P60604 165 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 RUNX1Q01196 453 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 EDDM3AQ14507 147 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 MPV17LQ2QL34 196 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 ADPRHL1Q8NDY3 354 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 UCN2Q96RP3 112 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 EDEM2Q9BV94 578 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 TMED3Q9Y3Q3 217 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 SPTBN1Q01082 2364 aaKnown RBP12.24□□□□□ -0.45
COL6A1-201ENST00000361866 MASP2O00187 686 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 GABRA2P47869 451 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 ARG2P78540 354 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 ZNF658BQ4V348 819 aaPredicted RBP12.23□□□□□ -0.45
COL6A1-201ENST00000361866 PABPC1L2AQ5JQF8 200 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 NCR3LG1Q68D85 454 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 COMMD1Q8N668 190 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 FAM210BQ96KR6 192 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 SNX22Q96L94 193 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 DUSP23Q9BVJ7 150 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 PSENENQ9NZ42 101 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 C3orf85A0A1B0GTC6 90 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 LYPD3O95274 346 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 KRASP01116 189 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 CTSDP07339 412 aaPredicted RBP12.23□□□□□ -0.45
COL6A1-201ENST00000361866 ERVK-16P61578 105 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 NAAAQ02083 359 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 Q3ZCU0 254 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 ZNF721Q8TF20 911 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 HEYLQ9NQ87 328 aaPredicted RBP12.23□□□□□ -0.45
COL6A1-201ENST00000361866 P4HTMQ9NXG6 502 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 ZNF107Q9UII5 783 aaPredicted RBP12.23□□□□□ -0.45
COL6A1-201ENST00000361866 DOCK9Q9BZ29 2069 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 ZNF732B4DXR9 585 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 ACKR3P25106 362 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 STPG1Q5TH74 334 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 BAGE3Q86Y29 109 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 BAGE2Q86Y30 109 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 OR1F12Q8NHA8 337 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 NAT6Q93015 286 aa12.23□□□□□ -0.45
COL6A1-201ENST00000361866 RCC2Q9P258 522 aaKnown RBP12.23□□□□□ -0.45
COL6A1-201ENST00000361866 ERRFI1Q9UJM3 462 aaPredicted RBP12.23□□□□□ -0.45
COL6A1-201ENST00000361866 DIDO1Q9BTC0 2240 aaKnown RBP12.23□□□□□ -0.45
COL6A1-201ENST00000361866 C2CD4DB7Z1M9 353 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 AQP3Q92482 292 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 SPSB1Q96BD6 273 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 TIMP4Q99727 224 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 ADAM19Q9H013 955 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 MTCL1Q9Y4B5 1905 aaKnown RBP12.22□□□□□ -0.45
COL6A1-201ENST00000361866 TRAV39A0A0B4J263 110 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 UBE2L5PA0A1B0GUS4 154 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 NKX2-6A6NCS4 301 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 PIAS2O75928 621 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 SUMO3P55854 103 aaPredicted RBP12.22□□□□□ -0.45
COL6A1-201ENST00000361866 C1orf100Q5SVJ3 147 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 OR13D1Q8NGV5 346 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 SLC39A7Q92504 469 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 FOXB1Q99853 325 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 HEATR5AQ86XA9 2040 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 E9PQ18 207 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 CD200P41217 278 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 DLK1P80370 383 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 ZNF154Q13106 437 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 PARP11Q9NR21 331 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 H3BQ15 152 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 CD8AP01732 235 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 FSTP19883 344 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 SULT1A2P50226 295 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 DHODHQ02127 395 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 CATR1Q13166 79 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 UNC119Q13432 240 aa12.22□□□□□ -0.45
COL6A1-201ENST00000361866 WIPI1Q5MNZ9 446 aaPredicted RBP12.22□□□□□ -0.45
COL6A1-201ENST00000361866 RALGAPA1Q6GYQ0 2036 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 IGKV1D-43A0A0B4J1Z2 117 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 MDFIC2A0A1B0GVS7 189 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 CLDN34H7C241 214 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 CHST1O43916 411 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 KLK2P20151 261 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 DYNLT3P51808 116 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 CLDN15P56746 228 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 APCDD1LQ8NCL9 501 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 RHBDD1Q8TEB9 315 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 R4GN57 208 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 GBF1Q92538 1859 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 CLEC18AA5D8T8 446 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 A8MXE2 369 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 ATP6V0CP27449 155 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 H3F3AP84243 136 aa12.21□□□□□ -0.45
COL6A1-201ENST00000361866 LIAT1Q6ZQX7 453 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms