RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 LPAR5Q9H1C0 372 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 SLC52A3Q9NQ40 469 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 A0A0U1RQS6 177 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 STATHP02808 62 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 HIST1H1EP10412 219 aaKnown RBP4.5□□□□□ -1.69
SKP1-202ENST00000353411 OR1D4P47884 311 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 SPANXN5Q5MJ07 72 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 ASTLQ6HA08 431 aaPredicted RBP4.5□□□□□ -1.69
SKP1-202ENST00000353411 SLC36A1Q7Z2H8 476 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 NEU1Q99519 415 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 GPA33Q99795 319 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 PCGF1Q9BSM1 259 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 PRTFDC1Q9NRG1 225 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 VSIG4Q9Y279 399 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 NTNG1Q9Y2I2 539 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 KIAA1551Q9HCM1 1747 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 TAF1P21675 1872 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 A0A1W2PRS3 328 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 OTOL1A6NHN0 477 aaPredicted RBP4.5□□□□□ -1.69
SKP1-202ENST00000353411 C11orf94C9JXX5 98 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 H7C1C5 153 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 APBB3O95704 486 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 B3GALT4O96024 378 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 CD5P06127 495 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 FBLP22087 321 aaKnown RBP4.5□□□□□ -1.69
SKP1-202ENST00000353411 ZBTB25P24278 435 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 MFSD12Q6NUT3 480 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 VASH2Q86V25 355 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 SGMS2Q8NHU3 365 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 Q8WTZ3 238 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 VN1R1Q9GZP7 353 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 SLC2A8Q9NY64 477 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 JKAMPQ9P055 326 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 XIRP1Q702N8 1843 aaKnown RBP4.5□□□□□ -1.69
SKP1-202ENST00000353411 SNURFLB1AK76 121 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 HLA-GP17693 338 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 CSN1S1P47710 185 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 RTL8BQ17RB0 113 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 KRTCAP3Q53RY4 240 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 Q6ZVU0 165 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 C17orf78Q8N4C9 275 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 RNF186Q9NXI6 227 aa4.5□□□□□ -1.69
SKP1-202ENST00000353411 GFYI3L273 518 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 GNG7O60262 68 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 HIST1H1DP16402 221 aaKnown RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 GLRA1P23415 457 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 RIPPLY3P57055 190 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.49□□□□□ -1.69
SKP1-202ENST00000353411 C9orf135Q5VTT2 229 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 CARD17Q5XLA6 110 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 ERASQ7Z444 233 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 TSEN54Q7Z6J9 526 aaKnown RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 OR5D18Q8NGL1 313 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 KLRF1Q9NZS2 232 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 ABI3Q9P2A4 366 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 ZNF835Q9Y2P0 537 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 F8VVB4 439 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 F8VWA3 439 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 IGHG1P01857 330 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 SLC37A1P57057 533 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 ODF1Q14990 250 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 EXT1Q16394 746 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 EOGTQ5NDL2 527 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 TPGS2Q68CL5 300 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 LAIR1Q6GTX8 287 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 GATSQ8NAP1 163 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 OR10J5Q8NHC4 309 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 NRSN2Q9GZP1 204 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 KIR3DX1Q9H7L2 352 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 A6NNC1 897 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 H0YL77 283 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 OR7C1O76099 320 aaPredicted RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 HLA-DQA1P01909 254 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 MMP9P14780 707 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 FUT3P21217 361 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 LSM6P62312 80 aaKnown RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 MEF2BQ02080 365 aaPredicted RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 PRRG4Q9BZD6 226 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 SAP30LQ9HAJ7 183 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 UBE2L5PA0A1B0GUS4 154 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 IDSB3KWA1 339 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 APCSP02743 223 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 LIPFP07098 398 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 BTCP35070 178 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 KIR3DL2P43630 455 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 DYNLT3P51808 116 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 ATP5IP56385 69 aaPredicted RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 SLC48A1Q6P1K1 146 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 MYPOPQ86VE0 399 aaPredicted RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 LOC102725191A0A1B0GVB3 256 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 NPIPB15A6NHN6 443 aaPredicted RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 LEFTY2O00292 366 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 FMODQ06828 376 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 ELAVL3Q14576 367 aaKnown RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 MRPL54Q6P161 138 aaKnown RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 APCDD1LQ8NCL9 501 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 ABHD14BQ96IU4 210 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 IL17FQ96PD4 163 aa4.49□□□□□ -1.69
SKP1-202ENST00000353411 CPEB1Q9BZB8 566 aaKnown RBP4.49□□□□□ -1.69
SKP1-202ENST00000353411 OBP2BQ9NPH6 170 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms