RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 IGHV4-34P06331 123 aa11.52□□□□□ -0.56
USP47-202ENST00000339865 ZNF735P0CB33 412 aa11.52□□□□□ -0.56
USP47-202ENST00000339865 GCSAMLQ5JQS6 135 aa11.52□□□□□ -0.56
USP47-202ENST00000339865 SLC39A5Q6ZMH5 540 aa11.52□□□□□ -0.56
USP47-202ENST00000339865 PARS2Q7L3T8 475 aaKnown RBP11.52□□□□□ -0.56
USP47-202ENST00000339865 GRAMD2BQ96HH9 432 aa11.52□□□□□ -0.56
USP47-202ENST00000339865 THYN1Q9P016 225 aa11.52□□□□□ -0.56
USP47-202ENST00000339865 SLC17A2O00624 439 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 PPP1R17O96001 155 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 PGA4P0DJD7 388 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 PGA5P0DJD9 388 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 PCOLCE2Q9UKZ9 415 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 SPEM2Q0P670 501 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 MRPL58Q14197 206 aaKnown RBP11.52□□□□□ -0.57
USP47-202ENST00000339865 WFDC3Q8IUB2 231 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 ADTRPQ96IZ2 230 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 CACNG5Q9UF02 275 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 GSTZ1O43708 216 aaPredicted RBP11.52□□□□□ -0.57
USP47-202ENST00000339865 MT-CO3P00414 261 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 OR5AC1P0C628 307 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 ISL1P61371 349 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.52□□□□□ -0.57
USP47-202ENST00000339865 SARGQ9BW04 601 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 CMC2Q9NRP2 79 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 IGHV3-20A0A0C4DH32 117 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 A0A1W2PRD5 423 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 A0A1W2PRF3 423 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 A0A1W2PRM7 423 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 NPBWR2P48146 333 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 B3GALT4O96024 378 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 SSBP1Q04837 148 aaKnown RBP11.52□□□□□ -0.57
USP47-202ENST00000339865 TUBA4BQ9H853 241 aa11.52□□□□□ -0.57
USP47-202ENST00000339865 AURKAIP1Q9NWT8 199 aaPredicted RBP11.52□□□□□ -0.57
USP47-202ENST00000339865 A0A1B0GV90 55 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 C9orf170A2RU37 121 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 SELENBP1Q13228 472 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 DHRS2Q13268 280 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 CIRBPQ14011 172 aaKnown RBP11.51□□□□□ -0.57
USP47-202ENST00000339865 ARIH2OSQ8N7S6 290 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 LINC00052Q96N35 136 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 RGPD8O14715 1765 aaPredicted RBP11.51□□□□□ -0.57
USP47-202ENST00000339865 TMSB15BA0A087X1C1 80 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 SYNGR2O43760 224 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 BRS3P32247 399 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 PSG5Q15238 335 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 HSF5Q4G112 596 aaPredicted RBP11.51□□□□□ -0.57
USP47-202ENST00000339865 RTP2Q5QGT7 225 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 TAAR3PQ9P1P4 343 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 FZR1Q9UM11 496 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 VSIG4Q9Y279 399 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 VAMP5O95183 116 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 PRRX1P54821 245 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 NUFIP2Q7Z417 695 aaKnown RBP11.51□□□□□ -0.57
USP47-202ENST00000339865 ZNF740Q8NDX6 193 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 OR5R1Q8NH85 324 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 ANKRD36A6QL64 1941 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 TMEM30CPA0ZSE6 113 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 HMX2A2RU54 273 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 NDUFS8O00217 210 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 FKBP2P26885 142 aaKnown RBP11.51□□□□□ -0.57
USP47-202ENST00000339865 ZNF252P-AS1Q0IIN9 211 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 NTNG2Q96CW9 530 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 ERRFI1Q9UJM3 462 aaPredicted RBP11.51□□□□□ -0.57
USP47-202ENST00000339865 A4GNTQ9UNA3 340 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 NUP98P52948 1817 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 FAM157AC9JC47 383 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 RPL18Q07020 188 aaKnown RBP11.51□□□□□ -0.57
USP47-202ENST00000339865 IL10RAQ13651 578 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 PNLIPRP3Q17RR3 467 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 ERASQ7Z444 233 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 SLC46A2Q9BY10 475 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 KCNAB3O43448 404 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 HERPUD1Q15011 391 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 SHBQ15464 509 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 RPEQ96AT9 228 aa11.51□□□□□ -0.57
USP47-202ENST00000339865 INSM2Q96T92 566 aaPredicted RBP11.51□□□□□ -0.57
USP47-202ENST00000339865 XRN1Q8IZH2 1706 aaKnown RBP11.51□□□□□ -0.57
USP47-202ENST00000339865 RNF165Q6ZSG1 346 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 PRSS37A4D1T9 235 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 IQCF3P0C7M6 154 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 PF4V1P10720 104 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 IGFBP7Q16270 282 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 GGTA1PQ4G0N0 100 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 MRGPREQ86SM8 312 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 SLC25A43Q8WUT9 341 aaPredicted RBP11.5□□□□□ -0.57
USP47-202ENST00000339865 HSPB9Q9BQS6 159 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 MS4A8Q9BY19 250 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 Q9Y3F1 56 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 HIST1H1BP16401 226 aaKnown RBP11.5□□□□□ -0.57
USP47-202ENST00000339865 RRN3P1Q2M238 152 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 SLC48A1Q6P1K1 146 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 ZNF600Q6ZNG1 722 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 ZNF441Q8N8Z8 693 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 SMIM14Q96QK8 99 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 SIRT7Q9NRC8 400 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 TMEM167BQ9NRX6 74 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 SLCO1C1Q9NYB5 712 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 FBXL17Q9UF56 701 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 C1SP09871 688 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 HLA-GP17693 338 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms