RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 RNF114Q9Y508 228 aa4.92□□□□□ -1.62
SSX3-201ENST00000298396 NPTNQ9Y639 398 aa4.92□□□□□ -1.62
SSX3-201ENST00000298396 IGKV1D-17A0A075B6S4 117 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 A0A0B4J203 849 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 TRAV1-2A0A0B4J238 106 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 A0A1W2PP11 408 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 hCG_1807616A0A1W2PRN6 198 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 SMIM30A4D0T7 59 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 FAM157AC9JC47 383 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 CLDN25C9JDP6 229 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 H7C1Q1 480 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 LGALS8O00214 317 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 NDUFS8O00217 210 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 NOS1APO75052 506 aaPredicted RBP4.91□□□□□ -1.62
SSX3-201ENST00000298396 KDM4BO94953 1096 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 CDRT1O95170 752 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 FSTL3O95633 263 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 TSPAN15O95858 294 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 SERPINA3P01011 423 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 IGHV2-5P01817 119 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 CD2P06729 351 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 ERCC1P07992 297 aaPredicted RBP4.91□□□□□ -1.62
SSX3-201ENST00000298396 HCKP08631 526 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 ACAA1P09110 424 aaPredicted RBP4.91□□□□□ -1.62
SSX3-201ENST00000298396 CALCBP10092 127 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 GALP22466 123 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 PRKACBP22694 351 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 PSMA1P25786 263 aaKnown RBP4.91□□□□□ -1.62
SSX3-201ENST00000298396 MAPK3P27361 379 aaPredicted RBP4.91□□□□□ -1.62
SSX3-201ENST00000298396 CALRP27797 417 aaKnown RBP4.91□□□□□ -1.62
SSX3-201ENST00000298396 GPR6P46095 362 aaPredicted RBP4.91□□□□□ -1.62
SSX3-201ENST00000298396 CEBPDP49716 269 aaPredicted RBP4.91□□□□□ -1.62
SSX3-201ENST00000298396 ATP1B3P54709 279 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 CAV3P56539 151 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 TMEM33P57088 247 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 OR10A3P58181 314 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 DSCR9P59020 149 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 BTG1P62324 171 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 QRFPP83859 136 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 SRSF3P84103 164 aaKnown RBP4.91□□□□□ -1.62
SSX3-201ENST00000298396 MZT1Q08AG7 82 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 PLA2G7Q13093 441 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 CTF1Q16619 201 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 HFEQ30201 348 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 ZNF404Q494X3 552 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 HSD17B12Q53GQ0 312 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 TMEM177Q53S58 311 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 STUMQ69YW2 141 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 ZNF841Q6ZN19 808 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 BIVMQ86UB2 503 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 SATL1Q86VE3 508 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 LRRC28Q86X40 367 aaPredicted RBP4.91□□□□□ -1.62
SSX3-201ENST00000298396 ZNF573Q86YE8 665 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 DEFB108BQ8NET1 73 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 Q8NFD4 153 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 OR11L1Q8NGX0 322 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 OR10K1Q8NGX5 313 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 ANGPTL6Q8NI99 470 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 PHYHIPQ92561 330 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 SLC25A28Q96A46 364 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 GAFA1Q96PS6 74 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 HIST1H2AAQ96QV6 131 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 CHCHD6Q9BRQ6 235 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 REG4Q9BYZ8 158 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 TMEM138Q9NPI0 162 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 SNTG1Q9NSN8 517 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 SLC7A11Q9UPY5 501 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 HIVEP2P31629 2446 aa4.91□□□□□ -1.62
SSX3-201ENST00000298396 PPIAL4EA0A075B759 164 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 LOC100506127A0A0U1RQW1 187 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 OOEPA6NGQ2 149 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 CEACAM18A8MTB9 384 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 PPIAL4DF5H284 164 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 IFNL4K9M1U5 179 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 SLC22A1O15245 554 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 GYPAP02724 150 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 PPIAL4FP0DN26 164 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 PSG2P11465 335 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 SLC25A16P16260 332 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 ZFP36P26651 326 aaKnown RBP4.9□□□□□ -1.63
SSX3-201ENST00000298396 CFPP27918 469 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 SDC2P34741 201 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 ZNF93P35789 620 aaPredicted RBP4.9□□□□□ -1.63
SSX3-201ENST00000298396 MDH2P40926 338 aaKnown RBP4.9□□□□□ -1.63
SSX3-201ENST00000298396 PTGFRP43088 359 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 NCS1P62166 190 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 LSM3P62310 102 aaKnown RBP4.9□□□□□ -1.63
SSX3-201ENST00000298396 PPP3R1P63098 170 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 LOXL1Q08397 574 aaPredicted RBP4.9□□□□□ -1.63
SSX3-201ENST00000298396 UNC119Q13432 240 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 TMEM155Q4W5P6 130 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 C1orf100Q5SVJ3 147 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 ELP2Q6IA86 826 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 Q6P435 159 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 METAP1DQ6UB28 335 aaPredicted RBP4.9□□□□□ -1.63
SSX3-201ENST00000298396 RTN4RL2Q86UN3 420 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 ANKRD13BQ86YJ7 626 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 SAXO1Q8IYX7 474 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 JAGN1Q8N5M9 183 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 CD177Q8N6Q3 437 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms