RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 PHYHIPQ92561 330 aa23.4■■□□□ 1.34
SMARCD3-201ENST00000262188 RFT1Q96AA3 541 aa23.4■■□□□ 1.34
SMARCD3-201ENST00000262188 TINAGL1Q9GZM7 467 aaPredicted RBP23.4■■□□□ 1.34
SMARCD3-201ENST00000262188 CGGBP1Q9UFW8 167 aaPredicted RBP23.4■■□□□ 1.34
SMARCD3-201ENST00000262188 CST4P01036 141 aa23.4■■□□□ 1.34
SMARCD3-201ENST00000262188 APOBEC3AP31941 199 aaPredicted RBP23.4■■□□□ 1.34
SMARCD3-201ENST00000262188 VEGFCP49767 419 aa23.4■■□□□ 1.34
SMARCD3-201ENST00000262188 NKPD1Q17RQ9 610 aa23.4■■□□□ 1.34
SMARCD3-201ENST00000262188 MRPL15Q9P015 296 aaKnown RBP23.4■■□□□ 1.34
SMARCD3-201ENST00000262188 FOXJ3Q9UPW0 622 aa23.4■■□□□ 1.34
SMARCD3-201ENST00000262188 TRAV1-2A0A0B4J238 106 aa23.39■■□□□ 1.33
SMARCD3-201ENST00000262188 FAM230AA0A1W2PPH8 454 aa23.39■■□□□ 1.33
SMARCD3-201ENST00000262188 ATF1P18846 271 aa23.39■■□□□ 1.33
SMARCD3-201ENST00000262188 OPCMLQ14982 345 aa23.39■■□□□ 1.33
SMARCD3-201ENST00000262188 MST1LQ2TV78 715 aa23.39■■□□□ 1.33
SMARCD3-201ENST00000262188 ZNF565Q8N9K5 539 aa23.39■■□□□ 1.33
SMARCD3-201ENST00000262188 SCARB1Q8WTV0 552 aa23.39■■□□□ 1.33
SMARCD3-201ENST00000262188 SFT2D1Q8WV19 159 aa23.39■■□□□ 1.33
SMARCD3-201ENST00000262188 C10orf35Q96D05 121 aa23.39■■□□□ 1.33
SMARCD3-201ENST00000262188 PSMG3-AS1Q96PY0 264 aa23.39■■□□□ 1.33
SMARCD3-201ENST00000262188 OR51J1Q9H342 316 aa23.39■■□□□ 1.33
SMARCD3-201ENST00000262188 DBX1A6NMT0 343 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 SULT1A3P0DMM9 295 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 SULT1A4P0DMN0 295 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 THBS2P35442 1172 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 MTNR1BP49286 362 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 PYHIN1Q6K0P9 492 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 ZDHHC23Q8IYP9 409 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 DMBX1Q8NFW5 382 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 THRSPQ92748 146 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 ADAT1Q9BUB4 502 aaKnown RBP23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 UBTD1Q9HAC8 227 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 TMEM100Q9NV29 134 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 IGKV1-27A0A075B6S5 117 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 HCKP08631 526 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 SPRNQ5BIV9 151 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 CRIP3Q6Q6R5 217 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 SLITRK2Q9H156 845 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 NUBP2Q9Y5Y2 271 aa23.38■■□□□ 1.33
SMARCD3-201ENST00000262188 A0A0G2JK05 382 aa23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 F5H5P2 479 aa23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 SULT1C2O00338 296 aa23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 SPRY3O43610 288 aa23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 CTAG2O75638 210 aa23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 GLAP06280 429 aa23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 FCER2P06734 321 aa23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 BDKRB2P30411 391 aa23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 GPM6AP51674 278 aa23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 SELENOVP59797 346 aa23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 MUC15Q8N387 334 aa23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 FTMTQ8N4E7 242 aa23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 OR2Z1Q8NG97 314 aa23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 OR5D18Q8NGL1 313 aa23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 NKX6-2Q9C056 277 aaPredicted RBP23.37■■□□□ 1.33
SMARCD3-201ENST00000262188 RAB3BP20337 219 aa23.36■■□□□ 1.33
SMARCD3-201ENST00000262188 OR8G1Q15617 311 aa23.36■■□□□ 1.33
SMARCD3-201ENST00000262188 GLCCI1Q86VQ1 547 aa23.36■■□□□ 1.33
SMARCD3-201ENST00000262188 OR5P3Q8WZ94 311 aa23.36■■□□□ 1.33
SMARCD3-201ENST00000262188 TMEM138Q9NPI0 162 aa23.36■■□□□ 1.33
SMARCD3-201ENST00000262188 DLL4Q9NR61 685 aa23.36■■□□□ 1.33
SMARCD3-201ENST00000262188 ANXA2P2A6NMY6 339 aa23.36■■□□□ 1.33
SMARCD3-201ENST00000262188 HS3ST1O14792 307 aa23.36■■□□□ 1.33
SMARCD3-201ENST00000262188 WDR86Q86TI4 376 aa23.36■■□□□ 1.33
SMARCD3-201ENST00000262188 JAGN1Q8N5M9 183 aa23.36■■□□□ 1.33
SMARCD3-201ENST00000262188 PLSCR5A0PG75 271 aa23.35■■□□□ 1.33
SMARCD3-201ENST00000262188 FAM221AA4D161 298 aa23.35■■□□□ 1.33
SMARCD3-201ENST00000262188 NDUFS6O75380 124 aaKnown RBP23.35■■□□□ 1.33
SMARCD3-201ENST00000262188 SOD3P08294 240 aa23.35■■□□□ 1.33
SMARCD3-201ENST00000262188 ZNF295-AS1Q8N0V1 137 aa23.35■■□□□ 1.33
SMARCD3-201ENST00000262188 C12orf45Q8N5I9 185 aaPredicted RBP23.35■■□□□ 1.33
SMARCD3-201ENST00000262188 OR8S1Q8NH09 359 aa23.35■■□□□ 1.33
SMARCD3-201ENST00000262188 PRF1P14222 555 aa23.34■■□□□ 1.33
SMARCD3-201ENST00000262188 EVX1P49640 407 aa23.34■■□□□ 1.33
SMARCD3-201ENST00000262188 CLDN12P56749 244 aa23.34■■□□□ 1.33
SMARCD3-201ENST00000262188 CEACAM21Q3KPI0 293 aa23.34■■□□□ 1.33
SMARCD3-201ENST00000262188 ANGPTL5Q86XS5 388 aa23.34■■□□□ 1.33
SMARCD3-201ENST00000262188 NANPQ8TBE9 248 aa23.34■■□□□ 1.33
SMARCD3-201ENST00000262188 MPC1Q9Y5U8 109 aa23.34■■□□□ 1.33
SMARCD3-201ENST00000262188 AKAP6Q13023 2319 aa23.34■■□□□ 1.33
SMARCD3-201ENST00000262188 ZNF732B4DXR9 585 aa23.34■■□□□ 1.33
SMARCD3-201ENST00000262188 HPGDSO60760 199 aa23.34■■□□□ 1.33
SMARCD3-201ENST00000262188 FBXL14Q8N1E6 418 aa23.34■■□□□ 1.33
SMARCD3-201ENST00000262188 OR13G1Q8NGZ3 307 aa23.34■■□□□ 1.33
SMARCD3-201ENST00000262188 PCNPQ8WW12 178 aaKnown RBP23.34■■□□□ 1.33
SMARCD3-201ENST00000262188 CACNA1DQ01668 2161 aa23.33■■□□□ 1.33
SMARCD3-201ENST00000262188 CELSR2Q9HCU4 2923 aa23.33■■□□□ 1.33
SMARCD3-201ENST00000262188 LOC100289279A0A1B0GTE1 492 aa23.33■■□□□ 1.33
SMARCD3-201ENST00000262188 VSTM5A8MXK1 200 aa23.33■■□□□ 1.33
SMARCD3-201ENST00000262188 C3orf80F5H4A9 247 aa23.33■■□□□ 1.33
SMARCD3-201ENST00000262188 CNN3Q15417 329 aaKnown RBP23.33■■□□□ 1.33
SMARCD3-201ENST00000262188 MZT2AQ6P582 158 aa23.33■■□□□ 1.33
SMARCD3-201ENST00000262188 CNIH2Q6PI25 160 aa23.33■■□□□ 1.33
SMARCD3-201ENST00000262188 KCNK15Q9H427 330 aa23.33■■□□□ 1.33
SMARCD3-201ENST00000262188 ARFGEF3Q5TH69 2177 aa23.33■■□□□ 1.33
SMARCD3-201ENST00000262188 A0A1B0GWJ7 208 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 CLN5O75503 358 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 IGHV2-70P01814 119 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 APOC3P02656 99 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 FBP1P09467 338 aa23.32■■□□□ 1.32
SMARCD3-201ENST00000262188 MTCP1P56278 107 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms