RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 PcnpQ6P8I4 178 aaKnown RBP9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rbms1Q91W59 403 aaKnown RBP9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gng12Q9DAS9 72 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r41Q9EQ44 310 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gk2Q9WU65 554 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr785A0A0N4SVC3 312 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1291-ps1A0A286YE47 326 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r103K7N6X7 305 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r151L7N288 305 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Cdk2ap1O35207 114 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Idh3gP70404 393 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Arf1P84078 181 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 BaxQ07813 192 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 MybphlQ5FW53 355 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Klf3Q60980 344 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 March1Q6NZQ8 289 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rab35Q6PHN9 201 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tmem108Q8BHE4 574 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Zc3h12dQ8BIY3 533 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Stbd1Q8C7E7 338 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rnf113a1Q8R3P8 341 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr582Q8VGV9 319 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr979Q8VH10 311 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Nat8Q9JIY7 227 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Dctn6Q9WUB4 190 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr485A0A140LJF5 317 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1314A2AVL6 312 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Wsb1O54927 421 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 P01804 111 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 GusbP12265 648 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gabra2P26048 451 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tcfl5Q32NY8 489 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Pafah1b3Q61205 232 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Npepl1Q6NSR8 524 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1282Q7TQY5 305 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr851Q7TRG0 312 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Upp2Q8CGR7 320 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr512Q8VFZ4 326 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Lims1Q99JW4 325 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Arrdc1Q99KN1 434 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Bbc3Q99ML1 193 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gnpnat1Q9JK38 184 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gng13Q9JMF3 67 aa9.25□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 PrnA0A075B668 197 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm45808A0A1B0GSH8 263 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Susd1E9Q3H4 752 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ntsr1O88319 424 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rasd2P63032 266 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ear2P97425 156 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Q3USZ8 430 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Kcnip4Q6PHZ8 250 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1014Q7TR95 305 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1013Q7TR96 305 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vwc2Q8C8N3 324 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Il24Q925S4 181 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ms4a4dQ99N05 225 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 PrndQ9QUG3 179 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Pfdn5Q9WU28 154 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1150-ps1A0A1L1STL1 316 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 9130019O22RikG3X941 543 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm8660K7N6J2 305 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Serf1O88892 62 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Klf16P58334 251 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ccdc106Q3ULM0 279 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ptp4a1Q63739 173 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Plppr5Q8BJ52 321 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Q8C4X7 151 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Dleu7Q8CHZ8 209 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr678Q8VG26 313 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Efcab10Q9D581 132 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 TpbgQ9Z0L0 426 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Padi1Q9Z185 662 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm14403A2BFU4 402 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rd3lB2RV38 197 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm9972E9Q053 102 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Lsm2O35900 95 aaKnown RBP9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 P01654 111 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 P01656 111 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 P01881 257 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 P01882 290 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 P03977 111 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 SnrpnP63163 240 aaKnown RBP9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tgif1P70284 272 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Hist1h3bP84228 136 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr332Q5NC45 344 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tob1Q61471 362 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 TpppQ7TQD2 218 aaKnown RBP9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 LmlnQ8BMN4 681 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tsen54Q8C2A2 525 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Fbxo4Q8CHQ0 385 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr187Q8VEX6 308 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr368Q8VF22 327 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1389Q8VGX0 311 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Riox1Q9JJF3 603 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Taf1Q80UV9 1891 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn2r108E9PYS0 855 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ccdc74aE9Q9U8 364 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Zbtb25G3UW50 439 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 A630095N17RikJ3KMM7 116 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr628K7N6B2 316 aa9.24□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms