RNA–Protein interactions for RNA: ENST00000637686.1

CLN3-261, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-261ENST00000637686 A6NIN4 97 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 PPIAL4DF5H284 164 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 ZNF780AO75290 641 aaPredicted RBP8.26□□□□□ -1.09
CLN3-261ENST00000637686 BPNT1O95861 308 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 HCKP08631 526 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 PPIAL4FP0DN26 164 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 HOXB4P17483 251 aaPredicted RBP8.26□□□□□ -1.09
CLN3-261ENST00000637686 RAB6AP20340 208 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 MPZP25189 248 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 MDH2P40926 338 aaKnown RBP8.26□□□□□ -1.09
CLN3-261ENST00000637686 ETV6P41212 452 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 RIPPLY3P57055 190 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 OR10A3P58181 314 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 RAB11BQ15907 218 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 TMEM155Q4W5P6 130 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 DMRTC1Q5HYR2 192 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 PLCXD3Q63HM9 321 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 MOB3CQ70IA8 216 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 OR2W3Q7Z3T1 314 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 ZNF573Q86YE8 665 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 C11orf53Q8IXP5 236 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 SPICQ8N5J4 248 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 BOLLQ8N9W6 283 aaKnown RBP8.26□□□□□ -1.09
CLN3-261ENST00000637686 C19orf18Q8NEA5 215 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 TBC1D15Q8TC07 691 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 HPSE2Q8WWQ2 592 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 SLC25A28Q96A46 364 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 ORAI1Q96D31 301 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 RNF170Q96K19 258 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 RTL8AQ9BWD3 113 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 FGF23Q9GZV9 251 aaPredicted RBP8.26□□□□□ -1.09
CLN3-261ENST00000637686 PLGRKTQ9HBL7 147 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 TMEM165Q9HC07 324 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 SMURF1Q9HCE7 757 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 PCDHB16Q9NRJ7 776 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 GPR173Q9NS66 373 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 IL36GQ9NZH8 169 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 RNF7Q9UBF6 113 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 PPIAL4AQ9Y536 164 aa8.26□□□□□ -1.09
CLN3-261ENST00000637686 ABCA2Q9BZC7 2435 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 ZFHX3Q15911 3703 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 FN1P02751 2386 aaKnown RBP8.25□□□□□ -1.09
CLN3-261ENST00000637686 A0A0A6YYH2 397 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 A6NJ64 397 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 CEACAM18A8MTB9 384 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 LDLRAD4O15165 306 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 CRLF1O75462 422 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 SCGNO76038 276 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 APOA1P02647 267 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 MSMBP08118 114 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 PTBP1P26599 531 aaKnown RBP eCLIP8.25□□□□□ -1.09
CLN3-261ENST00000637686 S100A5P33763 92 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 PTGFRP43088 359 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 GPM6AP51674 278 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 BMXP51813 675 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 DVL1P1P54792 670 aaPredicted RBP8.25□□□□□ -1.09
CLN3-261ENST00000637686 MTCP1P56278 107 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 ZP1P60852 638 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 ZNF154Q13106 437 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 LSAMPQ13449 338 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 GPR176Q14439 515 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 IDNKQ5T6J7 187 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 SFRP4Q6FHJ7 346 aaPredicted RBP8.25□□□□□ -1.09
CLN3-261ENST00000637686 CRIP3Q6Q6R5 217 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 GLCCI1Q86VQ1 547 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 MUC20Q8N307 709 aaPredicted RBP8.25□□□□□ -1.09
CLN3-261ENST00000637686 JAGN1Q8N5M9 183 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 DEFB108BQ8NET1 73 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 Q8NFD4 153 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 OR6Q1Q8NGQ2 317 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 S100ZQ8WXG8 99 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 RAB40AQ8WXH6 277 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 FAM3DQ96BQ1 224 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 MRPS24Q96EL2 167 aaKnown RBP8.25□□□□□ -1.09
CLN3-261ENST00000637686 TMEM246Q9BRR3 403 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 TLNRD1Q9H1K6 362 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 CNTD2Q9H8S5 307 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 LIN7BQ9HAP6 207 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 PATZ1Q9HBE1 687 aaKnown RBP8.25□□□□□ -1.09
CLN3-261ENST00000637686 HIF1ANQ9NWT6 349 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 DAPK2Q9UIK4 370 aa8.25□□□□□ -1.09
CLN3-261ENST00000637686 ZNF732B4DXR9 585 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 C3orf80F5H4A9 247 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 J3QT63 122 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 CDIPTO14735 213 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 NOS1APO75052 506 aaPredicted RBP8.24□□□□□ -1.09
CLN3-261ENST00000637686 FSTL3O95633 263 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 LHBP01229 141 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 WNT2P09544 360 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 ARSBP15848 533 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 EGR1P18146 543 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 ZFP36P26651 326 aaKnown RBP8.24□□□□□ -1.09
CLN3-261ENST00000637686 CD80P33681 288 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 CFHR2P36980 270 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 CAV3P56539 151 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 SEC61A1P61619 476 aaKnown RBP8.24□□□□□ -1.09
CLN3-261ENST00000637686 LCN2P80188 198 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 IL24Q13007 206 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 PDZK1IP1Q13113 114 aa8.24□□□□□ -1.09
CLN3-261ENST00000637686 CR1LQ2VPA4 569 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms