RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 EMG1Q92979 244 aaKnown RBP11.32□□□□□ -0.6
PNKP-228ENST00000637325 ZNF747Q9BV97 191 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 CHIAQ9BZP6 476 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 FAM234AQ9H0X4 552 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 DPAGT1Q9H3H5 408 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 ISG20L2Q9H9L3 353 aaKnown RBP11.32□□□□□ -0.6
PNKP-228ENST00000637325 UNKLQ9H9P5 680 aaKnown RBP11.32□□□□□ -0.6
PNKP-228ENST00000637325 NEK6Q9HC98 313 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 C19orf12Q9NSK7 152 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 ERVK13-1Q9NX77 482 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 MTCH1Q9NZJ7 389 aa11.32□□□□□ -0.6
PNKP-228ENST00000637325 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.32□□□□□ -0.6
PNKP-228ENST00000637325 SF3B6Q9Y3B4 125 aaKnown RBP11.32□□□□□ -0.6
PNKP-228ENST00000637325 MEIOCA2RUB1 952 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 BTBD17A6NE02 478 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 OR4C45A6NMZ5 311 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 ANGPTL7O43827 346 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 IGHA1P01876 353 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 RPSAP08865 295 aaKnown RBP11.31□□□□□ -0.6
PNKP-228ENST00000637325 CCDC159P0C7I6 412 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 OMGP23515 440 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 UBE2E1P51965 193 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 COL10A1Q03692 680 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 MRPL28Q13084 256 aaKnown RBP11.31□□□□□ -0.6
PNKP-228ENST00000637325 LPCAT4Q643R3 524 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 LHFPL2Q6ZUX7 228 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 LDLRAD3Q86YD5 345 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 Q8IYB0 196 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 OR10AC1Q8NH08 325 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 CYGBQ8WWM9 190 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 TAF15Q92804 592 aaKnown RBP eCLIP11.31□□□□□ -0.6
PNKP-228ENST00000637325 TNFRSF14Q92956 283 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 SPSB1Q96BD6 273 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 OPALINQ96PE5 141 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 COMMD4Q9H0A8 199 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 C8orf4Q9NR00 106 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 GLS2Q9UI32 602 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 NBEAL1Q6ZS30 2694 aa11.31□□□□□ -0.6
PNKP-228ENST00000637325 IGKV1-9A0A0C4DH69 117 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 TMEM212A6NML5 194 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 POM121CA8CG34 1229 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 F8VVB4 439 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 F8VWA3 439 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 K7N7A8 449 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 IGHV4-59P01825 116 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 PIPP12273 146 aaPredicted RBP11.3□□□□□ -0.6
PNKP-228ENST00000637325 IER3P46695 156 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 TTC23Q5W5X9 447 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 TMEM200BQ69YZ2 307 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 SHISA2Q6UWI4 295 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 GDPD3Q7L5L3 318 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 PNKDQ8N490 385 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 OR51A4Q8NGJ6 313 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 OR4F5Q8NH21 305 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 OR5AK2Q8NH90 309 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 SGMS2Q8NHU3 365 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 HAVCR2Q8TDQ0 301 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 APH1BQ8WW43 257 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 DYRK2Q92630 601 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 RFT1Q96AA3 541 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 ZCCHC4Q9H5U6 513 aa11.3□□□□□ -0.6
PNKP-228ENST00000637325 MRPS18AQ9NVS2 196 aaKnown RBP11.3□□□□□ -0.6
PNKP-228ENST00000637325 TRBV2A0A0J9YWF9 115 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 IRGMA1A4Y4 181 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 SPRY1O43609 319 aaPredicted RBP11.29□□□□□ -0.6
PNKP-228ENST00000637325 HAND1O96004 215 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 PRKACAP17612 351 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 BCL3P20749 454 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 MDKP21741 143 aaPredicted RBP11.29□□□□□ -0.6
PNKP-228ENST00000637325 SAA4P35542 130 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 RAG2P55895 527 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 EDDM3BP56851 147 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 ACSM1Q08AH1 577 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 PDZK1IP1Q13113 114 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 RCN1Q15293 331 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 SMN1Q16637 294 aaKnown RBP11.29□□□□□ -0.6
PNKP-228ENST00000637325 ZNF691Q5VV52 312 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 FAM58AQ8N1B3 248 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 PACRGLQ8N7B6 248 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 ZSCAN4Q8NAM6 433 aaPredicted RBP11.29□□□□□ -0.6
PNKP-228ENST00000637325 SETD9Q8NE22 299 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 OR13C9Q8NGT0 318 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 TSEN15Q8WW01 171 aaKnown RBP11.29□□□□□ -0.6
PNKP-228ENST00000637325 SNX22Q96L94 193 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 HEXA-AS1Q9H8Q6 139 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 BEX1Q9HBH7 125 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 FGF20Q9NP95 211 aaPredicted RBP11.29□□□□□ -0.6
PNKP-228ENST00000637325 RBFOX1Q9NWB1 397 aaKnown RBP11.29□□□□□ -0.6
PNKP-228ENST00000637325 DHDHQ9UQ10 334 aa11.29□□□□□ -0.6
PNKP-228ENST00000637325 A0A1B0GUS0 222 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 E9PI62 339 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 GPR137BO60478 399 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 WBP4O75554 376 aaKnown RBP11.28□□□□□ -0.6
PNKP-228ENST00000637325 ZFPL1O95159 310 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 CLIC3O95833 236 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 HCKP08631 526 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 CALCBP10092 127 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 CCL3L1P16619 93 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 GABRR1P24046 479 aa11.28□□□□□ -0.6
PNKP-228ENST00000637325 COX7A1P24310 79 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms