RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 MPDZO75970 2070 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 NKX6-1P78426 367 aaPredicted RBP19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 GLO1Q04760 184 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 SGCBQ16585 318 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 ZNF101Q8IZC7 436 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 OR52N4Q8NGI2 321 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 RAB24Q969Q5 203 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 NTNG2Q96CW9 530 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 TXNIPQ9H3M7 391 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 C14orf166Q9Y224 244 aaKnown RBP19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 TRAV36DV7A0A075B6V5 113 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 HIST1H2BKO60814 126 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 HIST1H2BJP06899 126 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 HIST1H2BOP23527 126 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 HIST1H2BBP33778 126 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 HIST1H2BDP58876 126 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 HIST1H2BCP62807 126 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 CHAF1BQ13112 559 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 GAMTQ14353 236 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 NNATQ16517 81 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 HIST2H2BEQ16778 126 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 ATP1A1-AS1Q5TC04 95 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 C1orf140Q5VVS0 124 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 HIST1H2BHQ93079 126 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 HIST1H2BNQ99877 126 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 HIST1H2BMQ99879 126 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 OR10A5Q9H207 317 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 PRR13Q9NZ81 148 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 HS3ST3B1Q9Y662 390 aa19.2■□□□□ 0.66
POLR2J3-220ENST00000613744 A8MVM7 634 aa19.19■□□□□ 0.66
POLR2J3-220ENST00000613744 PRKNO60260 465 aaPredicted RBP19.19■□□□□ 0.66
POLR2J3-220ENST00000613744 GPR137BO60478 399 aa19.19■□□□□ 0.66
POLR2J3-220ENST00000613744 WT1P19544 449 aaPredicted RBP19.19■□□□□ 0.66
POLR2J3-220ENST00000613744 OR3A2P47893 321 aa19.19■□□□□ 0.66
POLR2J3-220ENST00000613744 SLC6A8P48029 635 aa19.19■□□□□ 0.66
POLR2J3-220ENST00000613744 MMP16P51512 607 aa19.19■□□□□ 0.66
POLR2J3-220ENST00000613744 ELOBQ15370 118 aa19.19■□□□□ 0.66
POLR2J3-220ENST00000613744 SLC22A25Q6T423 547 aa19.19■□□□□ 0.66
POLR2J3-220ENST00000613744 ST7LQ8TDW4 575 aa19.19■□□□□ 0.66
POLR2J3-220ENST00000613744 FGGYQ96C11 551 aa19.19■□□□□ 0.66
POLR2J3-220ENST00000613744 FBXO7Q9Y3I1 522 aa19.19■□□□□ 0.66
POLR2J3-220ENST00000613744 TMEM269A0A1B0GVZ9 245 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 KLK10O43240 276 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 AMY2BP19961 511 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 LSM6P62312 80 aaKnown RBP19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 FUT7Q11130 342 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 ACKR1Q16570 336 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 PCK2Q16822 640 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 KHDC3LQ587J8 217 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 CPEB2Q7Z5Q1 589 aaKnown RBP19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 OR5D14Q8NGL3 314 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 C16orf52Q8NHV5 167 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 KCNG3Q8TAE7 436 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 KCNE4Q8WWG9 221 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 DAZLQ92904 295 aaKnown RBP19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 NOL4LQ96MY1 436 aaPredicted RBP19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 PUS1Q9Y606 427 aaKnown RBP eCLIP19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 LOC400499M0QZD8 3231 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 OR13C7P0DN81 318 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 OR13C9Q8NGT0 318 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 ZDHHC8Q9ULC8 765 aa19.18■□□□□ 0.66
POLR2J3-220ENST00000613744 CACNA1AO00555 2505 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 ZNF726A6NNF4 738 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 DDAH2O95865 285 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 PRH1P02810 166 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 CTLA4P16410 223 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 GALNSP34059 522 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 CCR4P51679 360 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 SSPNQ14714 243 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 CD226Q15762 336 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 C1QL3Q5VWW1 255 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 SPNS3Q6ZMD2 512 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 PPP1R32Q7Z5V6 425 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 MARCH3Q86UD3 253 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 FOXRED2Q8IWF2 684 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 BEND2Q8NDZ0 799 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 SMIM3Q9BZL3 60 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 NELFAQ9H3P2 528 aa19.17■□□□□ 0.66
POLR2J3-220ENST00000613744 P2RY10O00398 339 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 LMX1BO60663 402 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 CLPSP04118 112 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 HPGDP15428 266 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 PI3P19957 117 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 GLRA1P23415 457 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 PLAC9Q5JTB6 97 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 CLEC9AQ6UXN8 241 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 MFSD8Q8NHS3 518 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 Q8WTZ3 238 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 SLC25A43Q8WUT9 341 aaPredicted RBP19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 ERGIC1Q969X5 290 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 C1QTNF9BB2RNN3 333 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 K7N7A8 449 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 SCDO00767 359 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 C1QTNF9P0C862 333 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 ZNF823P16415 610 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 GNALP38405 381 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 SLC37A1P57057 533 aa19.16■□□□□ 0.66
POLR2J3-220ENST00000613744 ZNF248Q8NDW4 579 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms