RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 OR11H6Q8NGC7 330 aa13.74□□□□□ -0.21
SCAF1-204ENST00000601038 FOXRED1Q96CU9 486 aaPredicted RBP13.74□□□□□ -0.21
SCAF1-204ENST00000601038 TBX5Q99593 518 aa13.74□□□□□ -0.21
SCAF1-204ENST00000601038 TCF19Q9Y242 345 aa13.74□□□□□ -0.21
SCAF1-204ENST00000601038 IGKV1-27A0A075B6S5 117 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 ODF3BA8MYP8 253 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 GATBO75879 557 aaKnown RBP13.73□□□□□ -0.21
SCAF1-204ENST00000601038 SERPINA3P01011 423 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 VSIG10L2P0DP72 767 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 HTR1FP30939 366 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 RAB13P51153 203 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 EDDM3BP56851 147 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 MEF2CQ06413 473 aaPredicted RBP13.73□□□□□ -0.21
SCAF1-204ENST00000601038 ZNF626Q68DY1 528 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 CCBE1Q6UXH8 406 aaPredicted RBP13.73□□□□□ -0.21
SCAF1-204ENST00000601038 OR8H2Q8N162 312 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 Q8N2B8 174 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 C10orf35Q96D05 121 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 SNX22Q96L94 193 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 NKX3-1Q99801 234 aaPredicted RBP13.73□□□□□ -0.21
SCAF1-204ENST00000601038 ADI1Q9BV57 179 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 CHST5Q9GZS9 411 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 ZNF702PQ9H963 129 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 SEBOXQ9HB31 216 aaPredicted RBP13.73□□□□□ -0.21
SCAF1-204ENST00000601038 AP4S1Q9Y587 144 aa13.73□□□□□ -0.21
SCAF1-204ENST00000601038 DSCAML1Q8TD84 2053 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 IGHV1-8P0DP01 117 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 FAM189A2Q15884 450 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 SSX2Q16385 188 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 HIST2H2BDQ6DRA6 164 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 SLC25A26Q70HW3 274 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 AMIGO2Q86SJ2 522 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 EGFL6Q8IUX8 553 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 OR10H4Q8NGA5 316 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 RPS4Y2Q8TD47 263 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 SLAMF9Q96A28 289 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 BORCS8Q96FH0 119 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 ZNF714Q96N38 554 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 CIB1Q99828 191 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 ABCB10Q9NRK6 738 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 SERTAD4Q9NUC0 356 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 PITPNC1Q9UKF7 332 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 CMYA5Q8N3K9 4069 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 PLXNB1O43157 2135 aa13.72□□□□□ -0.21
SCAF1-204ENST00000601038 TMEM82A0PJX8 343 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 A6NDX4 124 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 G3V4G9 280 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 H3BSH0 61 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 ATP6V1E1P36543 226 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 POLR2IP36954 125 aaKnown RBP13.71□□□□□ -0.21
SCAF1-204ENST00000601038 DYNLT3P51808 116 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 BNIP1Q12981 228 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 TMED1Q13445 227 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 CNN3Q15417 329 aaKnown RBP13.71□□□□□ -0.21
SCAF1-204ENST00000601038 BEAN1Q3B7T3 259 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 PLA1AQ53H76 456 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 LDLRAD2Q5SZI1 272 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 TCF23Q7RTU1 214 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 Q8IYB0 196 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 ENTHD1Q8IYW4 607 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 PRSS35Q8N3Z0 413 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 OR8J1Q8NGP2 316 aa13.71□□□□□ -0.21
SCAF1-204ENST00000601038 hADV38S2A0JD32 116 aa13.7□□□□□ -0.22
SCAF1-204ENST00000601038 MEX3AA1L020 520 aaKnown RBP13.7□□□□□ -0.22
SCAF1-204ENST00000601038 INMTO95050 263 aa13.7□□□□□ -0.22
SCAF1-204ENST00000601038 APOL3O95236 402 aa13.7□□□□□ -0.22
SCAF1-204ENST00000601038 FCGR1AP12314 374 aa13.7□□□□□ -0.22
SCAF1-204ENST00000601038 OR12D2P58182 307 aa13.7□□□□□ -0.22
SCAF1-204ENST00000601038 EMX1Q04741 257 aaPredicted RBP13.7□□□□□ -0.22
SCAF1-204ENST00000601038 DYNC1I2Q13409 638 aaKnown RBP13.7□□□□□ -0.22
SCAF1-204ENST00000601038 HABP2Q14520 560 aaPredicted RBP13.7□□□□□ -0.22
SCAF1-204ENST00000601038 KPRPQ5T749 579 aaPredicted RBP13.7□□□□□ -0.22
SCAF1-204ENST00000601038 SAMD5Q5TGI4 173 aa13.7□□□□□ -0.22
SCAF1-204ENST00000601038 TMEM219Q86XT9 240 aa13.7□□□□□ -0.22
SCAF1-204ENST00000601038 DNAAF1Q8NEP3 725 aa13.7□□□□□ -0.22
SCAF1-204ENST00000601038 PP6455Q8WZ26 134 aa13.7□□□□□ -0.22
SCAF1-204ENST00000601038 GABARAPL3Q9BY60 117 aa13.7□□□□□ -0.22
SCAF1-204ENST00000601038 LINC00312Q9Y6C7 94 aa13.7□□□□□ -0.22
SCAF1-204ENST00000601038 LOC107986453A0A1B0GWG9 222 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 FBXO24O75426 580 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 HAND1O96004 215 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 UBCP0CG48 685 aaKnown RBP13.69□□□□□ -0.22
SCAF1-204ENST00000601038 PEX2P28328 305 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 RBP2P50120 134 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 RASSF2P50749 326 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 ATP1B3P54709 279 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 ISL1P61371 349 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 ACTA2P62736 377 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 ACTG2P63267 376 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 ACTC1P68032 377 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 ACTA1P68133 377 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 EDDM3AQ14507 147 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 MINOS1Q5TGZ0 78 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 RDH10Q8IZV5 341 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 OR52N4Q8NGI2 321 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 EMG1Q92979 244 aaKnown RBP13.69□□□□□ -0.22
SCAF1-204ENST00000601038 RFKQ969G6 155 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 EME1Q96AY2 570 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 PRSS22Q9GZN4 317 aa13.69□□□□□ -0.22
SCAF1-204ENST00000601038 GNG8Q9UK08 70 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms