RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 NKIRAS2Q9NYR9 191 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 CGGBP1Q9UFW8 167 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 MPC1Q9Y5U8 109 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 TRAV8-7A0A075B6U6 113 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 TRAV1-2A0A0B4J238 106 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 IGKV1-9A0A0C4DH69 117 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 SMIM31A0A1B0GVY4 71 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 SHISA3A0PJX4 238 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 ANKRD61A6NGH8 418 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 ANKRD30BLA7E2S9 258 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 SPRY3O43610 288 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 ARL6IP5O75915 188 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 NRASP01111 189 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 OPN1MWP04001 364 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 OPN1MW2P0DN77 364 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 OPN1MW3P0DN78 364 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 CD37P11049 281 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 SRMP19623 302 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 PRDX4Q13162 271 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 HSD17B12Q53GQ0 312 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 LRRTM1Q86UE6 522 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 BHLHE23Q8NDY6 225 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 PIGCQ92535 297 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 DIRC2Q96SL1 478 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 SLC22A4Q9H015 551 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 EXOSC4Q9NPD3 245 aaKnown RBP11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 CYSLTR2Q9NS75 346 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 TMEM100Q9NV29 134 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 TAS2R4Q9NYW5 299 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 NDUFA13Q9P0J0 144 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 GSTK1Q9Y2Q3 226 aa11.52□□□□□ -0.57
SHKBP1-218ENST00000598907 LOC100506127A0A0U1RQW1 187 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 ZNF850A8MQ14 1090 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 MLNRO43193 412 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 GPR137BO60478 399 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 MPIG6BO95866 241 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 ALDOBP05062 364 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 ADH4P08319 380 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 ATF1P18846 271 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 CA6P23280 308 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 CALRP27797 417 aaKnown RBP11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 TGFBR1P36897 503 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 GNALP38405 381 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 LYPD6Q86Y78 171 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 OR1M1Q8NGA1 313 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 OR13G1Q8NGZ3 307 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 RAB2BQ8WUD1 216 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 HPSE2Q8WWQ2 592 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 OR5P3Q8WZ94 311 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 UPRTQ96BW1 309 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 ITPKCQ96DU7 683 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 KCTD7Q96MP8 289 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 TECTBQ96PL2 329 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 PAPOLGQ9BWT3 736 aaKnown RBP11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 FGF23Q9GZV9 251 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 ABCB9Q9NP78 766 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 BATF3Q9NR55 127 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 GPR173Q9NS66 373 aa11.51□□□□□ -0.57
SHKBP1-218ENST00000598907 TANC2Q9HCD6 1990 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 ZSCAN5BA6NJL1 495 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 ZNF701M0R085 212 aaPredicted RBP11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 SULT1B1O43704 296 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 MELTFP08582 738 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 MTNR1BP49286 362 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 ZNF81P51508 661 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 VBP1P61758 197 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 NCS1P62166 190 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 LSM3P62310 102 aaKnown RBP11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 PAX8Q06710 450 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 CEACAM21Q3KPI0 293 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 ESCO2Q56NI9 601 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 FAM76BQ5HYJ3 339 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 CEP78Q5JTW2 689 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 FOXB2Q5VYV0 432 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 CRIP3Q6Q6R5 217 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 Q6YL49 198 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 MOB3CQ70IA8 216 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 ZDHHC23Q8IYP9 409 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 DNAAF1Q8NEP3 725 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 OR5A2Q8NGI9 324 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 OR51A2Q8NGJ7 313 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 OR13C9Q8NGT0 318 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 ISOC1Q96CN7 298 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 GFI1Q99684 422 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 MSL2Q9HCI7 577 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 SNTG1Q9NSN8 517 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 NPTNQ9Y639 398 aa11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 DYNC2H1Q8NCM8 4307 aaKnown RBP11.5□□□□□ -0.57
SHKBP1-218ENST00000598907 PLSCR5A0PG75 271 aa11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 H3BMQ9 156 aa11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 IGHV1-46P01743 117 aa11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 IGHV2-70P01814 119 aa11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 CD55P08174 381 aa11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 RAB3AP20336 220 aa11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 AZGP1P25311 298 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 CNN3Q15417 329 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 BTNL3Q6UXE8 466 aa11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 TPRA1Q86W33 373 aa11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 CDH26Q8IXH8 852 aa11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 SPICQ8N5J4 248 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms