RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 TBX5Q99593 518 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 MICU1Q9BPX6 476 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 RTL8AQ9BWD3 113 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 FGF23Q9GZV9 251 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 S100A14Q9HCY8 104 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 ABCB9Q9NP78 766 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 GPR84Q9NQS5 396 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 MRM2Q9UI43 246 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 ORC6Q9Y5N6 252 aa11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 TSSC4Q9Y5U2 329 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-208ENST00000595726 LOC110117498-PIK3R3F6TDL0 507 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 CDIPTO14735 213 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 TTRP02766 147 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 JUNBP17275 347 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 COX7A1P24310 79 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 MAP2K3P46734 347 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 TMED1Q13445 227 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 ZIK1Q3SY52 487 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 ZNF788Q6ZQV5 615 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 COMMD2Q86X83 199 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 MRPL41Q8IXM3 137 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 ZDHHC23Q8IYP9 409 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 PQLC1Q8N2U9 271 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 TRUB1Q8WWH5 349 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 OR5P3Q8WZ94 311 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 PIGCQ92535 297 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 RFKQ969G6 155 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 MBOAT4Q96T53 435 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 C9orf16Q9BUW7 83 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 IMPAD1Q9NX62 359 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 GTF2A1LQ9UNN4 478 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 LSM4Q9Y4Z0 139 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 R4GMQ9 66 aa11.02□□□□□ -0.65
SHKBP1-208ENST00000595726 A0A1W2PQL4 384 aaPredicted RBP11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 TMEM210A6NLX4 147 aa11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 DHRS3O75911 302 aa11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 OR2T7P0C7T2 308 aa11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 ATP6V1B1P15313 513 aa11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 LGALS4P56470 323 aa11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 DCTN2Q13561 401 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 KHDC1LQ5JSQ8 128 aa11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 ZNF684Q5T5D7 378 aa11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 BCL2L15Q5TBC7 163 aa11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 FAM185AQ8N0U4 392 aa11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 OR2T27Q8NH04 317 aa11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 ITFG2Q969R8 447 aa11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 C12orf43Q96C57 262 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 OR52A1Q9UKL2 312 aa11.01□□□□□ -0.65
SHKBP1-208ENST00000595726 NKX6-3A6NJ46 265 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 VGLL3A8MV65 326 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 ENTPD6O75354 484 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 ZFPL1O95159 310 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 CLIC3O95833 236 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 KRT8P05787 483 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 LYL1P12980 280 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 SNRPGP62308 76 aaKnown RBP11□□□□□ -0.65
SHKBP1-208ENST00000595726 RIPPLY1Q0D2K3 151 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 FAM76BQ5HYJ3 339 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 CEP78Q5JTW2 689 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 SLC25A30Q5SVS4 291 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 LDLRAD2Q5SZI1 272 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 ETV3LQ6ZN32 361 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 KCTD8Q6ZWB6 473 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 ELMOD2Q8IZ81 293 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 C11orf42Q8N5U0 333 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 YIPF7Q8N8F6 280 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 ZNRF1Q8ND25 227 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 OR10H4Q8NGA5 316 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 ANGPTL6Q8NI99 470 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 RPL3LQ92901 407 aaKnown RBP11□□□□□ -0.65
SHKBP1-208ENST00000595726 MED30Q96HR3 178 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 RNF170Q96K19 258 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 SLC29A1Q99808 456 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 C19orf12Q9NSK7 152 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11□□□□□ -0.65
SHKBP1-208ENST00000595726 PIGLQ9Y2B2 252 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 SNX5Q9Y5X3 404 aa11□□□□□ -0.65
SHKBP1-208ENST00000595726 HERC2O95714 4834 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 PLECQ15149 4684 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 A0A1B0GTI1 187 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 METTL15A6NJ78 407 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 FAM90A8PA6NJQ4 464 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 H0YHG0 523 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 SIGLEC5O15389 551 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 MTRF1O75570 445 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 RHBDL1O75783 438 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 RPP14O95059 124 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 ACAA1P09110 424 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 GABRB1P18505 474 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 ATP6V1E1P36543 226 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 GABRA2P47869 451 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 GPM6AP51674 278 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 CAV3P56539 151 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 DGCR2P98153 550 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 ZNF85Q03923 595 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 SSX2Q16385 188 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 CEACAM21Q3KPI0 293 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 ZFAND6Q6FIF0 208 aa10.99□□□□□ -0.65
SHKBP1-208ENST00000595726 Q6ZSR3 168 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms