RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 VPREB3Q9UKI3 123 aa9.22□□□□□ -0.93
RPAIN-214ENST00000574003 MYRFQ9Y2G1 1151 aa9.22□□□□□ -0.93
RPAIN-214ENST00000574003 SIGLEC9Q9Y336 463 aa9.22□□□□□ -0.93
RPAIN-214ENST00000574003 RNF114Q9Y508 228 aa9.22□□□□□ -0.93
RPAIN-214ENST00000574003 ORC6Q9Y5N6 252 aa9.22□□□□□ -0.93
RPAIN-214ENST00000574003 GMPPBQ9Y5P6 360 aa9.22□□□□□ -0.93
RPAIN-214ENST00000574003 E9PI62 339 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 K7N7A8 449 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 SLC16A6O15403 523 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 ZNF737O75373 536 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 HTR1AP08908 422 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 JUNBP17275 347 aaPredicted RBP9.21□□□□□ -0.94
RPAIN-214ENST00000574003 ATF1P18846 271 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 FUT6P51993 359 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 DLX6P56179 175 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 EDDM3BP56851 147 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 ZNF91Q05481 1191 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 EDDM3AQ14507 147 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 OCLNQ16625 522 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 DHRS7BQ6IAN0 325 aaPredicted RBP9.21□□□□□ -0.94
RPAIN-214ENST00000574003 ZFP1Q6P2D0 407 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 BRICD5Q6PL45 260 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 LHFPL4Q7Z7J7 247 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 EGFL6Q8IUX8 553 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 ENTHD1Q8IYW4 607 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 DYNAPQ8N1N2 210 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 OR52N4Q8NGI2 321 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 PPP1R35Q8TAP8 253 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 TRUB1Q8WWH5 349 aaKnown RBP9.21□□□□□ -0.94
RPAIN-214ENST00000574003 EMG1Q92979 244 aaKnown RBP9.21□□□□□ -0.94
RPAIN-214ENST00000574003 PELI1Q96FA3 418 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 BORCS8Q96FH0 119 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 C4orf36Q96KX1 117 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 SSX3Q99909 188 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 CHST6Q9GZX3 395 aa9.21□□□□□ -0.94
RPAIN-214ENST00000574003 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.21□□□□□ -0.94
RPAIN-214ENST00000574003 SF3B6Q9Y3B4 125 aaKnown RBP9.21□□□□□ -0.94
RPAIN-214ENST00000574003 IGKV1-12A0A0C4DH73 117 aa9.2□□□□□ -0.94
RPAIN-214ENST00000574003 MEGF11A6BM72 1044 aa9.2□□□□□ -0.94
RPAIN-214ENST00000574003 OR4C45A6NMZ5 311 aa9.2□□□□□ -0.94
RPAIN-214ENST00000574003 GATBO75879 557 aaKnown RBP9.2□□□□□ -0.94
RPAIN-214ENST00000574003 HAND1O96004 215 aa9.2□□□□□ -0.94
RPAIN-214ENST00000574003 IGKV1D-12P01611 117 aa9.2□□□□□ -0.94
RPAIN-214ENST00000574003 UBCP0CG48 685 aaKnown RBP9.2□□□□□ -0.94
RPAIN-214ENST00000574003 DBTP11182 482 aaKnown RBP9.2□□□□□ -0.94
RPAIN-214ENST00000574003 AZGP1P25311 298 aaKnown RBP9.2□□□□□ -0.94
RPAIN-214ENST00000574003 PROK1P58294 105 aa9.2□□□□□ -0.94
RPAIN-214ENST00000574003 LDLRAD2Q5SZI1 272 aa9.2□□□□□ -0.94
RPAIN-214ENST00000574003 TREML4Q6UXN2 200 aa9.2□□□□□ -0.94
RPAIN-214ENST00000574003 ZSCAN4Q8NAM6 433 aaPredicted RBP9.2□□□□□ -0.94
RPAIN-214ENST00000574003 BEND2Q8NDZ0 799 aa9.2□□□□□ -0.94
RPAIN-214ENST00000574003 OR5D18Q8NGL1 313 aa9.2□□□□□ -0.94
RPAIN-214ENST00000574003 OR5D13Q8NGL4 314 aa9.2□□□□□ -0.94
RPAIN-214ENST00000574003 NKX3-1Q99801 234 aaPredicted RBP9.2□□□□□ -0.94
RPAIN-214ENST00000574003 CITED1Q99966 193 aa9.2□□□□□ -0.94
RPAIN-214ENST00000574003 ZNF649Q9BS31 505 aa9.2□□□□□ -0.94
RPAIN-214ENST00000574003 ALG8Q9BVK2 526 aa9.2□□□□□ -0.94
RPAIN-214ENST00000574003 EXOGQ9Y2C4 368 aaKnown RBP9.2□□□□□ -0.94
RPAIN-214ENST00000574003 CAB39Q9Y376 341 aaPredicted RBP9.2□□□□□ -0.94
RPAIN-214ENST00000574003 A0A1B0GUS0 222 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 BTBD17A6NE02 478 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 PSPNO60542 156 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 BAG2O95816 211 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 SERPINA3P01011 423 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 CHRM2P08172 466 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 ZNF20P17024 532 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 PRKACAP17612 351 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 RAB13P51153 203 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 ATP1B3P54709 279 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 MTCP1P56278 107 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 ACTC1P68032 377 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 ACTA1P68133 377 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 ACSM1Q08AH1 577 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 ALKBH1Q13686 389 aaKnown RBP9.19□□□□□ -0.94
RPAIN-214ENST00000574003 CNN3Q15417 329 aaKnown RBP9.19□□□□□ -0.94
RPAIN-214ENST00000574003 SMN1Q16637 294 aaKnown RBP9.19□□□□□ -0.94
RPAIN-214ENST00000574003 SLC25A30Q5SVS4 291 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 TMEM244Q5VVB8 128 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 ASPHD2Q6ICH7 369 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 SLC35E4Q6ICL7 350 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 FDX2Q6P4F2 183 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 CRIP3Q6Q6R5 217 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 BAIAP2L2Q6UXY1 529 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 GDPGP1Q6ZNW5 385 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 ZBTB49Q6ZSB9 765 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 PQLC1Q8N2U9 271 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 ACBD7Q8N6N7 88 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 OR4S1Q8NGB4 309 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 OR13C3Q8NGS6 347 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 OR13C9Q8NGT0 318 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 APH1BQ8WW43 257 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 FAM118AQ9NWS6 357 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 VWFP04275 2813 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 MEGF8Q7Z7M0 2845 aa9.19□□□□□ -0.94
RPAIN-214ENST00000574003 NOTCH1P46531 2555 aa9.18□□□□□ -0.94
RPAIN-214ENST00000574003 LOC100130705A0A1B0GUX0 176 aa9.18□□□□□ -0.94
RPAIN-214ENST00000574003 C17orf98A8MV24 154 aa9.18□□□□□ -0.94
RPAIN-214ENST00000574003 SIRPB1O00241 398 aa9.18□□□□□ -0.94
RPAIN-214ENST00000574003 CHST1O43916 411 aa9.18□□□□□ -0.94
RPAIN-214ENST00000574003 MMP23AO75900 390 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms