RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 SOSTQ9BQB4 213 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 NICN1Q9BSH3 213 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 TM2D1Q9BX74 207 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 EGLN1Q9GZT9 426 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 METTL9Q9H1A3 318 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 LPAR5Q9H1C0 372 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 ABCG5Q9H222 651 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 BANF2Q9H503 90 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 FN3KRPQ9HA64 309 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 PLGRKTQ9HBL7 147 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 NEK6Q9HC98 313 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 SMURF1Q9HCE7 757 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 TMEM106BQ9NUM4 274 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 RNF7Q9UBF6 113 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 PLEKHA6Q9Y2H5 1048 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 A3GALT2U3KPV4 340 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 PDZD2O15018 2839 aa7.86□□□□□ -1.15
HERC1-206ENST00000559996 TACC2O95359 2948 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 A6NLC8 198 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 RAB27BO00194 218 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 ZNF205O95201 554 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 HTR3BO95264 441 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 FSTL3O95633 263 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 EIF4EP06730 217 aaKnown RBP7.85□□□□□ -1.15
HERC1-206ENST00000559996 OCMP0CE72 109 aaPredicted RBP7.85□□□□□ -1.15
HERC1-206ENST00000559996 UBBP0CG47 229 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 BMP4P12644 408 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 DAOP14920 347 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 SERPINA2P20848 420 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 FGF12P61328 243 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 RPS27AP62979 156 aaKnown RBP7.85□□□□□ -1.15
HERC1-206ENST00000559996 ZNF146Q15072 292 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 PDCD1Q15116 288 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 PIGYQ3MUY2 71 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 MOGAT2Q3SYC2 334 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 SLC22A6Q4U2R8 563 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 NHLRC3Q5JS37 347 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 OR2W3Q7Z3T1 314 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 FAM90A1Q86YD7 464 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 CMTM4Q8IZR5 234 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 FAM58AQ8N1B3 248 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 PNLDC1Q8NA58 520 aaKnown RBP7.85□□□□□ -1.15
HERC1-206ENST00000559996 KCNG3Q8TAE7 436 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 CCL17Q92583 94 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 Q96M66 194 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 CMTM3Q96MX0 182 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 GSX2Q9BZM3 304 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 MMP27Q9H306 513 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 SEBOXQ9HB31 216 aaPredicted RBP7.85□□□□□ -1.15
HERC1-206ENST00000559996 RHOFQ9HBH0 211 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 TMEM165Q9HC07 324 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 RASL12Q9NYN1 266 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 COMMD3Q9UBI1 195 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 ZNF222Q9UK12 451 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 RAB22AQ9UL26 194 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 POLDIP2Q9Y2S7 368 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 KCNK7Q9Y2U2 307 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 VPS13CQ709C8 3753 aa7.85□□□□□ -1.15
HERC1-206ENST00000559996 IGKV1D-17A0A075B6S4 117 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 TRAPPC2LH3BP13 241 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 GEMIN2O14893 280 aaKnown RBP7.84□□□□□ -1.15
HERC1-206ENST00000559996 SOCS1O15524 211 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 HPGDSO60760 199 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 MPIG6BO95866 241 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 IGHV2-70P01814 119 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 PSG2P11465 335 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 MGMTP16455 207 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 ELK1P19419 428 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 RAB6AP20340 208 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 GLRA1P23415 457 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 LMO1P25800 156 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 DUSP1P28562 367 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 SOX6P35712 828 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 PTH2RP49190 550 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 GPR176Q14439 515 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 ZMYND11Q15326 602 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 RSU1Q15404 277 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 ATPAF1Q5TC12 328 aaPredicted RBP7.84□□□□□ -1.15
HERC1-206ENST00000559996 SFRP4Q6FHJ7 346 aaPredicted RBP7.84□□□□□ -1.15
HERC1-206ENST00000559996 LRRC28Q86X40 367 aaPredicted RBP7.84□□□□□ -1.15
HERC1-206ENST00000559996 KRTAP1-3Q8IUG1 177 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 LAX1Q8IWV1 398 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 OSR2Q8N2R0 312 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 CD177Q8N6Q3 437 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 OR5T2Q8NGG2 359 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 OR6Q1Q8NGQ2 317 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 MCFD2Q8NI22 146 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 ANGPTL6Q8NI99 470 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 ACOT12Q8WYK0 555 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 FAM46BQ96A09 425 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 MBD6Q96DN6 1003 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 CPNE2Q96FN4 548 aaPredicted RBP7.84□□□□□ -1.15
HERC1-206ENST00000559996 LURAP1Q96LR2 239 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 OCSTAMPQ9BR26 566 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 MRI1Q9BV20 369 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 CXorf56Q9H5V9 222 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 DLL4Q9NR61 685 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 PTTG2Q9NZH5 202 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 ST3GAL6Q9Y274 331 aa7.84□□□□□ -1.15
HERC1-206ENST00000559996 ARID1AO14497 2285 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms