RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 OPN1MW2P0DN77 364 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 OPN1MW3P0DN78 364 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 VSIG10L2P0DP72 767 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 FASP25445 335 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 HTR1FP30939 366 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 RAB13P51153 203 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 EDDM3BP56851 147 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 GDPD3Q7L5L3 318 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 EGFL6Q8IUX8 553 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 OR11H6Q8NGC7 330 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 SNX22Q96L94 193 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 NKX3-1Q99801 234 aaPredicted RBP12.85□□□□□ -0.35
TUBB3-213ENST00000557262 GABARAPL1Q9H0R8 117 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 SEBOXQ9HB31 216 aaPredicted RBP12.85□□□□□ -0.35
TUBB3-213ENST00000557262 AP4S1Q9Y587 144 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 IGKV1-27A0A075B6S5 117 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 ODF3BA8MYP8 253 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 H3BSH0 61 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 GATBO75879 557 aaKnown RBP12.84□□□□□ -0.35
TUBB3-213ENST00000557262 INMTO95050 263 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 IGHV1-8P0DP01 117 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 ATP6V1E1P36543 226 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 MEF2CQ06413 473 aaPredicted RBP12.84□□□□□ -0.35
TUBB3-213ENST00000557262 FAM189A2Q15884 450 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 ZNF626Q68DY1 528 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 HIST2H2BDQ6DRA6 164 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 AMIGO2Q86SJ2 522 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 OR8H2Q8N162 312 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 RPS4Y2Q8TD47 263 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 SLAMF9Q96A28 289 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 FOXRED1Q96CU9 486 aaPredicted RBP12.84□□□□□ -0.35
TUBB3-213ENST00000557262 C10orf35Q96D05 121 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 BORCS8Q96FH0 119 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 CHST5Q9GZS9 411 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 ABCB10Q9NRK6 738 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 TCF19Q9Y242 345 aa12.84□□□□□ -0.35
TUBB3-213ENST00000557262 A6NDX4 124 aa12.83□□□□□ -0.36
TUBB3-213ENST00000557262 POLR2IP36954 125 aaKnown RBP12.83□□□□□ -0.36
TUBB3-213ENST00000557262 EMX1Q04741 257 aaPredicted RBP12.83□□□□□ -0.36
TUBB3-213ENST00000557262 BNIP1Q12981 228 aa12.83□□□□□ -0.36
TUBB3-213ENST00000557262 TMED1Q13445 227 aa12.83□□□□□ -0.36
TUBB3-213ENST00000557262 CNN3Q15417 329 aaKnown RBP12.83□□□□□ -0.36
TUBB3-213ENST00000557262 SSX2Q16385 188 aa12.83□□□□□ -0.36
TUBB3-213ENST00000557262 PLA1AQ53H76 456 aa12.83□□□□□ -0.36
TUBB3-213ENST00000557262 CCBE1Q6UXH8 406 aaPredicted RBP12.83□□□□□ -0.36
TUBB3-213ENST00000557262 SLC25A26Q70HW3 274 aa12.83□□□□□ -0.36
TUBB3-213ENST00000557262 Q8N2B8 174 aa12.83□□□□□ -0.36
TUBB3-213ENST00000557262 OR10H4Q8NGA5 316 aa12.83□□□□□ -0.36
TUBB3-213ENST00000557262 ZNF714Q96N38 554 aa12.83□□□□□ -0.36
TUBB3-213ENST00000557262 CIB1Q99828 191 aa12.83□□□□□ -0.36
TUBB3-213ENST00000557262 ZNF702PQ9H963 129 aa12.83□□□□□ -0.36
TUBB3-213ENST00000557262 SERTAD4Q9NUC0 356 aa12.83□□□□□ -0.36
TUBB3-213ENST00000557262 PITPNC1Q9UKF7 332 aa12.83□□□□□ -0.36
TUBB3-213ENST00000557262 hADV38S2A0JD32 116 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 TMEM82A0PJX8 343 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 MEX3AA1L020 520 aaKnown RBP12.82□□□□□ -0.36
TUBB3-213ENST00000557262 G3V4G9 280 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 APOL3O95236 402 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 PEX2P28328 305 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 DYNLT3P51808 116 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 ATP1B3P54709 279 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 OR12D2P58182 307 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 DYNC1I2Q13409 638 aaKnown RBP12.82□□□□□ -0.36
TUBB3-213ENST00000557262 BEAN1Q3B7T3 259 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 LDLRAD2Q5SZI1 272 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 Q8IYB0 196 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 ENTHD1Q8IYW4 607 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 PRSS35Q8N3Z0 413 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 OR8J1Q8NGP2 316 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 PP6455Q8WZ26 134 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 PRSS22Q9GZN4 317 aa12.82□□□□□ -0.36
TUBB3-213ENST00000557262 HAND1O96004 215 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 FCGR1AP12314 374 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 RBP2P50120 134 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 RASSF2P50749 326 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 ACTA2P62736 377 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 ACTG2P63267 376 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 ACTC1P68032 377 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 ACTA1P68133 377 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 EDDM3AQ14507 147 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 HABP2Q14520 560 aaPredicted RBP12.81□□□□□ -0.36
TUBB3-213ENST00000557262 SAMD5Q5TGI4 173 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 MINOS1Q5TGZ0 78 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 TMEM219Q86XT9 240 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 RDH10Q8IZV5 341 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 DNAAF1Q8NEP3 725 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 OR52N4Q8NGI2 321 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 EMG1Q92979 244 aaKnown RBP12.81□□□□□ -0.36
TUBB3-213ENST00000557262 RFKQ969G6 155 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 EME1Q96AY2 570 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 LINC00312Q9Y6C7 94 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 MINOS1-NBL1R4GNA1 71 aa12.81□□□□□ -0.36
TUBB3-213ENST00000557262 LOC107986453A0A1B0GWG9 222 aa12.8□□□□□ -0.36
TUBB3-213ENST00000557262 H3BUI4 141 aa12.8□□□□□ -0.36
TUBB3-213ENST00000557262 DYNC1I1O14576 645 aa12.8□□□□□ -0.36
TUBB3-213ENST00000557262 FBXO24O75426 580 aa12.8□□□□□ -0.36
TUBB3-213ENST00000557262 CYB5AP00167 134 aa12.8□□□□□ -0.36
TUBB3-213ENST00000557262 IGHA1P01876 353 aa12.8□□□□□ -0.36
TUBB3-213ENST00000557262 UBCP0CG48 685 aaKnown RBP12.8□□□□□ -0.36
TUBB3-213ENST00000557262 KIR3DL2P43630 455 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms