RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 LRRK2Q5S007 2527 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 ROS1P08922 2347 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 H7C417 338 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 NXPH2O95156 264 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 INHBBP09529 407 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 NPBWR2P48146 333 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 PITPNBP48739 271 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 RBM11P57052 281 aaKnown RBP14.69□□□□□ -0.06
LETMD1-220ENST00000549686 CCL8P80075 99 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 MPV17LQ2QL34 196 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 SMIM21Q3B7S5 101 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 SPIN3Q5JUX0 258 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 PYHIN1Q6K0P9 492 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 FAM131AQ6UXB0 335 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 C1orf87Q8N0U7 546 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 MFSD4AQ8N468 514 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 OR4M1Q8NGD0 313 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 LRRC29Q8WV35 223 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 PSMG3-AS1Q96PY0 264 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 GAL3ST1Q99999 423 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 SOSTQ9BQB4 213 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 PLEKHF2Q9H8W4 249 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 HES4Q9HCC6 221 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 RBFOX1Q9NWB1 397 aaKnown RBP14.69□□□□□ -0.06
LETMD1-220ENST00000549686 GLS2Q9UI32 602 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 ST3GAL6Q9Y274 331 aa14.69□□□□□ -0.06
LETMD1-220ENST00000549686 SPTAN1Q13813 2472 aaKnown RBP14.68□□□□□ -0.06
LETMD1-220ENST00000549686 IGHV3-64DA0A0J9YX35 117 aa14.68□□□□□ -0.06
LETMD1-220ENST00000549686 A0A1W2PP11 408 aa14.68□□□□□ -0.06
LETMD1-220ENST00000549686 SRRM5B3KS81 715 aa14.68□□□□□ -0.06
LETMD1-220ENST00000549686 PRKACAP17612 351 aa14.68□□□□□ -0.06
LETMD1-220ENST00000549686 GLRA1P23415 457 aa14.68□□□□□ -0.06
LETMD1-220ENST00000549686 CDK2P24941 298 aa14.68□□□□□ -0.06
LETMD1-220ENST00000549686 CD40LGP29965 261 aa14.68□□□□□ -0.06
LETMD1-220ENST00000549686 MRPS10P82664 201 aaKnown RBP14.68□□□□□ -0.06
LETMD1-220ENST00000549686 MRPS11P82912 194 aaKnown RBP14.68□□□□□ -0.06
LETMD1-220ENST00000549686 PLA2G7Q13093 441 aa14.68□□□□□ -0.06
LETMD1-220ENST00000549686 ZNF826PQ6ZT77 177 aa14.68□□□□□ -0.06
LETMD1-220ENST00000549686 OR10R2Q8NGX6 335 aa14.68□□□□□ -0.06
LETMD1-220ENST00000549686 VRK1Q99986 396 aaPredicted RBP14.68□□□□□ -0.06
LETMD1-220ENST00000549686 SEBOXQ9HB31 216 aaPredicted RBP14.68□□□□□ -0.06
LETMD1-220ENST00000549686 SPACA1Q9HBV2 294 aa14.68□□□□□ -0.06
LETMD1-220ENST00000549686 LAMP3Q9UQV4 416 aa14.68□□□□□ -0.06
LETMD1-220ENST00000549686 PLEKHA6Q9Y2H5 1048 aa14.68□□□□□ -0.06
LETMD1-220ENST00000549686 V9GYH0 126 aa14.68□□□□□ -0.06
LETMD1-220ENST00000549686 RAB27BO00194 218 aa14.67□□□□□ -0.06
LETMD1-220ENST00000549686 LHBP01229 141 aa14.67□□□□□ -0.06
LETMD1-220ENST00000549686 SSTR2P30874 369 aa14.67□□□□□ -0.06
LETMD1-220ENST00000549686 VEGFCP49767 419 aa14.67□□□□□ -0.06
LETMD1-220ENST00000549686 IL18Q14116 193 aa14.67□□□□□ -0.06
LETMD1-220ENST00000549686 ZCCHC24Q8N2G6 241 aaKnown RBP14.67□□□□□ -0.06
LETMD1-220ENST00000549686 CACNG6Q9BXT2 260 aa14.67□□□□□ -0.06
LETMD1-220ENST00000549686 F8VVB4 439 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 F8VWA3 439 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 CTDSPLO15194 276 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 KNG1P01042 644 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 PMELP40967 661 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 PPP5CP53041 499 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 TAS2R20P59543 309 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 ZNF146Q15072 292 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 SPRNQ5BIV9 151 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 ACP7Q6ZNF0 438 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 GDPD1Q8N9F7 314 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 RAB3CQ96E17 227 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 ZNF488Q96MN9 340 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 IFT22Q9H7X7 185 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 DLL4Q9NR61 685 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 HSF4Q9ULV5 492 aa14.66□□□□□ -0.06
LETMD1-220ENST00000549686 TRAV18A0A075B6X5 111 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 IGHV1-69-2A0A0G2JMI3 117 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 FOXI3A8MTJ6 420 aaPredicted RBP14.65□□□□□ -0.06
LETMD1-220ENST00000549686 GEMIN2O14893 280 aaKnown RBP14.65□□□□□ -0.06
LETMD1-220ENST00000549686 GLAP06280 429 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 GSTP1P09211 210 aaKnown RBP14.65□□□□□ -0.06
LETMD1-220ENST00000549686 GABRR1P24046 479 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 BLVRBP30043 206 aaPredicted RBP14.65□□□□□ -0.06
LETMD1-220ENST00000549686 PTH2RP49190 550 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 TAF9Q16594 264 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 HFEQ30201 348 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 PIGYQ3MUY2 71 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 BIVMQ86UB2 503 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 GCSAMQ8N6F7 178 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 CHST4Q8NCG5 386 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 NEDD4LQ96PU5 975 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 NICN1Q9BSH3 213 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 CCDC32Q9BV29 185 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 CXorf56Q9H5V9 222 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.65□□□□□ -0.06
LETMD1-220ENST00000549686 TMEM106BQ9NUM4 274 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 MRPS7Q9Y2R9 242 aaKnown RBP14.65□□□□□ -0.06
LETMD1-220ENST00000549686 PKDREJQ9NTG1 2253 aa14.65□□□□□ -0.06
LETMD1-220ENST00000549686 COL12A1Q99715 3063 aa14.64□□□□□ -0.07
LETMD1-220ENST00000549686 A0A0A6YYD4 124 aa14.64□□□□□ -0.07
LETMD1-220ENST00000549686 A0A0G2JMP0 313 aa14.64□□□□□ -0.07
LETMD1-220ENST00000549686 A0A0X1KG70 313 aa14.64□□□□□ -0.07
LETMD1-220ENST00000549686 SERPINE3A8MV23 424 aa14.64□□□□□ -0.07
LETMD1-220ENST00000549686 OVOL3O00110 214 aa14.64□□□□□ -0.07
LETMD1-220ENST00000549686 SH2D1BO14796 132 aa14.64□□□□□ -0.07
LETMD1-220ENST00000549686 PDCD6O75340 191 aa14.64□□□□□ -0.07
LETMD1-220ENST00000549686 CA11O75493 328 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms