RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 GUCD1Q96NT3 240 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 OR6C1Q96RD1 312 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 SYT3Q9BQG1 590 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 TCEAL7Q9BRU2 100 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 PBDC1Q9BVG4 233 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 RBM24Q9BX46 236 aaKnown RBP8.41□□□□□ -1.06
CDH13-204ENST00000539548 SLC35B3Q9H1N7 401 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 C19orf25Q9UFG5 118 aaPredicted RBP8.41□□□□□ -1.06
CDH13-204ENST00000539548 ZDHHC8Q9ULC8 765 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 MTCH2Q9Y6C9 303 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 CHCHD2Q9Y6H1 151 aaPredicted RBP8.41□□□□□ -1.06
CDH13-204ENST00000539548 ABCA7Q8IZY2 2146 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 XIRP2A4UGR9 3374 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 SPTBN5Q9NRC6 3674 aaKnown RBP8.41□□□□□ -1.06
CDH13-204ENST00000539548 A0A1W2PPE3 182 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 A0A1W2PPH5 198 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 A6NLC8 198 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 UMAD1C9J7I0 102 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 SGCEO43556 437 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 DIRAS3O95661 229 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 IGHV2-5P01817 119 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 FABP1P07148 127 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 ZNF806P0C7X5 589 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 ZNF14P17017 642 aaPredicted RBP8.41□□□□□ -1.06
CDH13-204ENST00000539548 SNAI3Q3KNW1 292 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 SLC16A13Q7RTY0 426 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 LURAP1LQ8IV03 231 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 LFNGQ8NES3 379 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 OR1J1Q8NGS3 322 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 NTNG2Q96CW9 530 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 FBXO17Q96EF6 278 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 ZNF385AQ96PM9 386 aaKnown RBP8.41□□□□□ -1.06
CDH13-204ENST00000539548 SPSB2Q99619 263 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 SMDT1Q9H4I9 107 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 PLEK2Q9NYT0 353 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 NXT1Q9UKK6 140 aaKnown RBP8.41□□□□□ -1.06
CDH13-204ENST00000539548 IGKV1-27A0A075B6S5 117 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 NPIPA2E9PIF3 369 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 NPIPA3F8WFD2 350 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 XRCC2O43543 280 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 SPRY1O43609 319 aaPredicted RBP8.4□□□□□ -1.06
CDH13-204ENST00000539548 ANGPTL7O43827 346 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 PRH1P02810 166 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 SRFP11831 508 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 DAOP14920 347 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 CRYGSP22914 178 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 FHITP49789 147 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 MRPS34P82930 218 aaKnown RBP8.4□□□□□ -1.06
CDH13-204ENST00000539548 NHLH2Q02577 135 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 FABP9Q0Z7S8 132 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 CHAF1BQ13112 559 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 CNN3Q15417 329 aaKnown RBP8.4□□□□□ -1.06
CDH13-204ENST00000539548 KRBOX4Q5JUW0 171 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 FBXW12Q6X9E4 464 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 OR52M1Q8NGK5 317 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 ISOC2Q96AB3 205 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 KCNJ16Q9NPI9 418 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 GSN-AS1Q9NRJ2 163 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 SLC2A9Q9NRM0 540 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 FOXD3Q9UJU5 478 aaPredicted RBP8.4□□□□□ -1.06
CDH13-204ENST00000539548 TMED3Q9Y3Q3 217 aa8.4□□□□□ -1.06
CDH13-204ENST00000539548 TTC28Q96AY4 2481 aa8.4□□□□□ -1.07
CDH13-204ENST00000539548 BRWD1Q9NSI6 2320 aa8.4□□□□□ -1.07
CDH13-204ENST00000539548 RTTNQ86VV8 2226 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 CCDC187A0A096LP49 1063 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 NSG1A0A0A6YYJ2 146 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 FAM230AA0A1W2PPH8 454 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 LINC00587B1AMM8 73 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 CBR1P16152 277 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 RBP2P50120 134 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 SULT1A1P50225 295 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 RAB35Q15286 201 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 RSPO4Q2I0M5 234 aaPredicted RBP8.39□□□□□ -1.07
CDH13-204ENST00000539548 PHLDA2Q53GA4 152 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 TSPO2Q5TGU0 170 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 LHFPL2Q6ZUX7 228 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.39□□□□□ -1.07
CDH13-204ENST00000539548 ZIC4Q8N9L1 334 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 OR4D5Q8NGN0 318 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 TCEAL3Q969E4 200 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 MOB3AQ96BX8 217 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 MARS2Q96GW9 593 aaKnown RBP8.39□□□□□ -1.07
CDH13-204ENST00000539548 RSRP1Q9BUV0 290 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 C20orf24Q9BUV8 137 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 SH3BGRL3Q9H299 93 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 C11orf1Q9H5F2 150 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 BCO1Q9HAY6 547 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 ZNF581Q9P0T4 197 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 ZMAT5Q9UDW3 170 aaKnown RBP8.39□□□□□ -1.07
CDH13-204ENST00000539548 RARRES3Q9UL19 164 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 RCL1Q9Y2P8 373 aaKnown RBP8.39□□□□□ -1.07
CDH13-204ENST00000539548 ARID1AO14497 2285 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 K7N7A8 449 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 CYC1P08574 325 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 PNLIPP16233 465 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 STARD6P59095 220 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 FXYD4P59646 89 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 CLINT1Q14677 625 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 COL19A1Q14993 1142 aa8.39□□□□□ -1.07
CDH13-204ENST00000539548 PRAMEF20Q5VT98 475 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms