RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 SH2D7A6NKC9 451 aaPredicted RBP7.19□□□□□ -1.26
USP28-205ENST00000537706 ANXA2P2A6NMY6 339 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 FFAR1O14842 300 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 WBP4O75554 376 aaKnown RBP7.19□□□□□ -1.26
USP28-205ENST00000537706 LYPD3O95274 346 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 H1F0P07305 194 aaKnown RBP7.19□□□□□ -1.26
USP28-205ENST00000537706 CDX1P47902 265 aaPredicted RBP7.19□□□□□ -1.26
USP28-205ENST00000537706 ANKDD1AQ495B1 522 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 GPR107Q5VW38 600 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 RNLSQ5VYX0 342 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 DNM1P34Q6PK57 102 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 EGFL6Q8IUX8 553 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 SVOPQ8N4V2 548 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 AQP11Q8NBQ7 271 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 ZNRF1Q8ND25 227 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 OR6T1Q8NGN1 323 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 FAM81AQ8TBF8 368 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 RAB2BQ8WUD1 216 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 TMEM239Q8WW34 195 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 APH1BQ8WW43 257 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 NMNAT1Q9HAN9 279 aaPredicted RBP7.19□□□□□ -1.26
USP28-205ENST00000537706 COA3Q9Y2R0 106 aaPredicted RBP7.19□□□□□ -1.26
USP28-205ENST00000537706 TRBV4-1A0A0J9YWV2 114 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 A0A1W2PRQ8 180 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 RGS10O43665 173 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 PSPNO60542 156 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 SLC16A7O60669 478 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 RBP4P02753 201 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 CCL3L1P16619 93 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 GLRA1P23415 457 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 HIST1H3AP68431 136 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 ZNF92Q03936 586 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 DGCR6Q14129 220 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 KCNMB1Q16558 191 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 HAGHQ16775 308 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 FGD3Q5JSP0 725 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 HIST2H3PS2Q5TEC6 136 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 HIST2H3AQ71DI3 136 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 PRSS48Q7RTY5 328 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.19□□□□□ -1.26
USP28-205ENST00000537706 PRRC1Q96M27 445 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 BCL7BQ9BQE9 202 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 WFDC6Q9BQY6 131 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 FUZQ9BT04 418 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 RTL8AQ9BWD3 113 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 TUBA4BQ9H853 241 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 ABCB9Q9NP78 766 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 PLCXD1Q9NUJ7 323 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 KIAA1109Q2LD37 5005 aa7.19□□□□□ -1.26
USP28-205ENST00000537706 PRSS37A4D1T9 235 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 CXorf65A6NEN9 183 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 PTGES3LE9PB15 166 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 M0R135 149 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 IMPA2O14732 288 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 GABRB1P18505 474 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 HTR1DP28221 377 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 TAS2R41P59536 307 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 CDC42P60953 191 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 PNLIPRP3Q17RR3 467 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 KRTAP27-1Q3LI81 207 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 LINC00471Q8N535 108 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 OR4D11Q8NGI4 311 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 C4orf3Q8WVX3 66 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 ZNF799Q96GE5 643 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 DGCR6LQ9BY27 220 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 POLR2J2Q9GZM3 115 aaKnown RBP7.18□□□□□ -1.26
USP28-205ENST00000537706 POLR2J3Q9H1A7 115 aaKnown RBP7.18□□□□□ -1.26
USP28-205ENST00000537706 TLNRD1Q9H1K6 362 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 WDR13Q9H1Z4 485 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 TBC1D23Q9NUY8 699 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 IMPAD1Q9NX62 359 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 RHCGQ9UBD6 479 aa7.18□□□□□ -1.26
USP28-205ENST00000537706 KLK5Q9Y337 293 aaPredicted RBP7.18□□□□□ -1.26
USP28-205ENST00000537706 PLECQ15149 4684 aaKnown RBP7.18□□□□□ -1.26
USP28-205ENST00000537706 TMEM210A6NLX4 147 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 ZAR1LA6NP61 321 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 C17orf98A8MV24 154 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 XRCC2O43543 280 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 MPZL2O60487 215 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 MT-ND2P03891 347 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 TFF1P04155 84 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 GSSP48637 474 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 SMN1Q16637 294 aaKnown RBP7.17□□□□□ -1.26
USP28-205ENST00000537706 AHSA2Q719I0 299 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 SLC35E3Q7Z769 313 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 FAM71E2Q8N5Q1 922 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 OR11H1Q8NG94 326 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 RHOXF1Q8NHV9 184 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 FCGR1BQ92637 280 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 SDSLQ96GA7 329 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 NOL4LQ96MY1 436 aaPredicted RBP7.17□□□□□ -1.26
USP28-205ENST00000537706 PRSS27Q9BQR3 290 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 CCDC90BQ9GZT6 254 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 NAA50Q9GZZ1 169 aaKnown RBP7.17□□□□□ -1.26
USP28-205ENST00000537706 FKBP14Q9NWM8 211 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 ENPP5Q9UJA9 477 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 OVOL1O14753 267 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 AKR7A2O43488 359 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 GABARAPO95166 117 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 OR5F1O95221 314 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms