RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 SLC1A7O00341 560 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 ZNF737O75373 536 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 KDM4BO94953 1096 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 NXPH2O95156 264 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 TK1P04183 234 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 GNAO1P09471 354 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 ZNF20P17024 532 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 MYL12AP19105 171 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 PRTN3P24158 256 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 GABRA2P47869 451 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 MTCP1P56278 107 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 ARF6P62330 175 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 UBA52P62987 128 aaKnown RBP8.09□□□□□ -1.11
NUP98-220ENST00000533346 BDH1Q02338 343 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 GUCA2AQ02747 115 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 ST3GAL4Q11206 333 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 RIPK1Q13546 671 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 SPIN3Q5JUX0 258 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 ASCL4Q6XD76 172 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 Q6YL49 198 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 BCL6BQ8N143 479 aaPredicted RBP8.09□□□□□ -1.11
NUP98-220ENST00000533346 FGFRL1Q8N441 504 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 C11orf42Q8N5U0 333 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 PXT1Q8NFP0 134 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 OR5D13Q8NGL4 314 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 OR13C3Q8NGS6 347 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 GPR148Q8TDV2 347 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 NRG4Q8WWG1 115 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 GATAD2BQ8WXI9 593 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 SMIM19Q96E16 107 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 C1orf147Q96MC9 270 aaPredicted RBP8.09□□□□□ -1.11
NUP98-220ENST00000533346 ZNF488Q96MN9 340 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 PDCD1LG2Q9BQ51 273 aa8.09□□□□□ -1.11
NUP98-220ENST00000533346 IGHV1-69DA0A0B4J2H0 117 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 TRBV5-5A0A0J9YX44 114 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 A0A1W2PPH5 198 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 F8VVB4 439 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 F8VWA3 439 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 SULT1B1O43704 296 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 CYB5AP00167 134 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 IGHV1-69P01742 117 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 RBP4P02753 201 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 SFTPBP07988 381 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 RNASE1P07998 156 aaKnown RBP8.08□□□□□ -1.12
NUP98-220ENST00000533346 SELLP14151 372 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 ERP29P30040 261 aaKnown RBP8.08□□□□□ -1.12
NUP98-220ENST00000533346 BMXP51813 675 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 GTF2A1P52655 376 aaPredicted RBP8.08□□□□□ -1.12
NUP98-220ENST00000533346 TAS2R43P59537 309 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 ZP1P60852 638 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 RPL15P61313 204 aaKnown RBP8.08□□□□□ -1.12
NUP98-220ENST00000533346 IKZF1Q13422 519 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 YIF1BQ5BJH7 314 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 OR2G6Q5TZ20 316 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 NCR3LG1Q68D85 454 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 XAF1Q6GPH4 301 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 ELP2Q6IA86 826 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 ASPHD2Q6ICH7 369 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 RBMS3Q6XE24 437 aaKnown RBP8.08□□□□□ -1.12
NUP98-220ENST00000533346 SLC25A26Q70HW3 274 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 LDLRAD3Q86YD5 345 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 NANOGP1Q8N7R0 232 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 SIGLECL1Q8N7X8 197 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 TRMT10AQ8TBZ6 339 aaKnown RBP8.08□□□□□ -1.12
NUP98-220ENST00000533346 RGP1Q92546 391 aaPredicted RBP8.08□□□□□ -1.12
NUP98-220ENST00000533346 CPNE2Q96FN4 548 aaPredicted RBP8.08□□□□□ -1.12
NUP98-220ENST00000533346 SNX22Q96L94 193 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 PGLYRP3Q96LB9 341 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 PCGF1Q9BSM1 259 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 CDCA4Q9BXL8 241 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 METTL8Q9H825 291 aaKnown RBP8.08□□□□□ -1.12
NUP98-220ENST00000533346 HMG20AQ9NP66 347 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 CHCHD3Q9NX63 227 aaKnown RBP8.08□□□□□ -1.12
NUP98-220ENST00000533346 CLEC2DQ9UHP7 191 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 DHDHQ9UQ10 334 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 ZNF281Q9Y2X9 895 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 POMT1Q9Y6A1 747 aa8.08□□□□□ -1.12
NUP98-220ENST00000533346 IGKV1-12A0A0C4DH73 117 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 C17orf98A8MV24 154 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 LALBAP00709 142 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 IGKV1D-12P01611 117 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 CSN2P05814 226 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 CD2P06729 351 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 NDUFB7P17568 137 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 IGFBP3P17936 291 aaPredicted RBP8.07□□□□□ -1.12
NUP98-220ENST00000533346 RAB3AP20336 220 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 UBE2E1P51965 193 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 RPS11P62280 158 aaKnown RBP eCLIP8.07□□□□□ -1.12
NUP98-220ENST00000533346 MEF2CQ06413 473 aaPredicted RBP8.07□□□□□ -1.12
NUP98-220ENST00000533346 BLMHQ13867 455 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 SLC9A3R2Q15599 337 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 KISS1Q15726 138 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 C6orf141Q5SZD1 244 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 TMEM200BQ69YZ2 307 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 FIP1L1Q6UN15 594 aaKnown RBP8.07□□□□□ -1.12
NUP98-220ENST00000533346 VMO1Q7Z5L0 202 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 CDH26Q8IXH8 852 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 OR8H2Q8N162 312 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 FAM58AQ8N1B3 248 aa8.07□□□□□ -1.12
NUP98-220ENST00000533346 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms