RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 OR52B4Q8NGK2 314 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 C1QTNF6Q9BXI9 259 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 OPA3Q9H6K4 179 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 PIEZO2Q9H5I5 2752 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 DISC1C4P0D8 188 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 CSTBP04080 98 aaKnown RBP12.47□□□□□ -0.41
HDAC6-213ENST00000462730 VSIG10L2P0DP72 767 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 GABRR1P24046 479 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 CALCRP30988 508 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 SEC61A1P61619 476 aaKnown RBP12.47□□□□□ -0.41
HDAC6-213ENST00000462730 ARFRP1Q13795 201 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 TSC22D1Q15714 1073 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 GABRA6Q16445 453 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 NKPD1Q17RQ9 610 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 TBC1D28Q2M2D7 210 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 RNASE10Q5GAN6 216 aaKnown RBP12.47□□□□□ -0.41
HDAC6-213ENST00000462730 FAM57AQ8TBR7 257 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 Q96M66 194 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 SLC6A7Q99884 636 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 PECRQ9BY49 303 aa12.47□□□□□ -0.41
HDAC6-213ENST00000462730 B3GALNT1O75752 331 aa12.46□□□□□ -0.41
HDAC6-213ENST00000462730 CNOT4O95628 575 aaKnown RBP12.46□□□□□ -0.41
HDAC6-213ENST00000462730 CELA3BP08861 270 aa12.46□□□□□ -0.41
HDAC6-213ENST00000462730 ATF4P18848 351 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-213ENST00000462730 S100A11P31949 105 aa12.46□□□□□ -0.41
HDAC6-213ENST00000462730 PTGER4P35408 488 aa12.46□□□□□ -0.41
HDAC6-213ENST00000462730 NUP62P37198 522 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-213ENST00000462730 ASCL4Q6XD76 172 aa12.46□□□□□ -0.41
HDAC6-213ENST00000462730 SLC36A1Q7Z2H8 476 aa12.46□□□□□ -0.41
HDAC6-213ENST00000462730 MYPOPQ86VE0 399 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-213ENST00000462730 CCDC36Q8IYA8 594 aa12.46□□□□□ -0.41
HDAC6-213ENST00000462730 EIF4E3Q8N5X7 224 aaKnown RBP12.46□□□□□ -0.41
HDAC6-213ENST00000462730 CSNK2A3Q8NEV1 391 aa12.46□□□□□ -0.41
HDAC6-213ENST00000462730 LINC00052Q96N35 136 aa12.46□□□□□ -0.41
HDAC6-213ENST00000462730 OPN4Q9UHM6 478 aa12.46□□□□□ -0.41
HDAC6-213ENST00000462730 PFDN2Q9UHV9 154 aa12.46□□□□□ -0.41
HDAC6-213ENST00000462730 ANAPC10Q9UM13 185 aa12.46□□□□□ -0.41
HDAC6-213ENST00000462730 NCOR2Q9Y618 2525 aa12.46□□□□□ -0.41
HDAC6-213ENST00000462730 IGKV1-12A0A0C4DH73 117 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 UBE2QL1A1L167 161 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 HMSDA8MTL9 139 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 ARPC5O15511 151 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 RP2O75695 350 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 CST4P01036 141 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 IGKV1D-12P01611 117 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 NMBP08949 121 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 ZNF14P17017 642 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-213ENST00000462730 COX5AP20674 150 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 HRH1P35367 487 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 IDH3GP51553 393 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-213ENST00000462730 H2BFSP57053 126 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 PDZK1IP1Q13113 114 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 SCGB2B2Q4G0G5 96 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 PRR30Q53SZ7 412 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-213ENST00000462730 RGS7BPQ6MZT1 257 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-213ENST00000462730 ZDHHC23Q8IYP9 409 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 OR5L1Q8NGL2 311 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 OR10Z1Q8NGY1 313 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 STARD4Q96DR4 205 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 CXorf58Q96LI9 332 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.45□□□□□ -0.42
HDAC6-213ENST00000462730 PLSCR4Q9NRQ2 329 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 PROCRQ9UNN8 238 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 PLEKHA6Q9Y2H5 1048 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 CD300LBA8K4G0 201 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 TOR1AO14656 332 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 CBX5P45973 191 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 NKAPLQ5M9Q1 402 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 ALKAL2Q6UX46 152 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 UNQ6494/PRO21346Q6UXR6 183 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 HSD17B13Q7Z5P4 300 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-213ENST00000462730 PXT1Q8NFP0 134 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 ST8SIA4Q92187 359 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 SNRNP40Q96DI7 357 aaKnown RBP12.45□□□□□ -0.42
HDAC6-213ENST00000462730 FGF23Q9GZV9 251 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-213ENST00000462730 SHARPINQ9H0F6 387 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 OPN3Q9H1Y3 402 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-213ENST00000462730 CDH20Q9HBT6 801 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 TUBD1Q9UJT1 453 aa12.45□□□□□ -0.42
HDAC6-213ENST00000462730 INTS1Q8N201 2190 aaKnown RBP12.44□□□□□ -0.42
HDAC6-213ENST00000462730 PQLC2LA1A4F0 135 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 CGAP01215 116 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 IL2RAP01589 272 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 PMP2P02689 132 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 TBPP20226 339 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 HOXC12P31275 282 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 SPATA46Q5T0L3 261 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 TMUB2Q71RG4 321 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 CALHM1Q8IU99 346 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 BHLHE23Q8NDY6 225 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 OR5T2Q8NGG2 359 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 OR4K15Q8NH41 348 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 SCARB1Q8WTV0 552 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 HPSE2Q8WWQ2 592 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 ZCCHC14Q8WYQ9 949 aaKnown RBP12.44□□□□□ -0.42
HDAC6-213ENST00000462730 PRRT1Q99946 306 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 SLC25A21Q9BQT8 299 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-213ENST00000462730 OCSTAMPQ9BR26 566 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 IL36GQ9NZH8 169 aa12.44□□□□□ -0.42
HDAC6-213ENST00000462730 ZNF629Q9UEG4 869 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms